Pseudomonas denitrificans (nom. rej.): F1C79_24020
Help
Entry
F1C79_24020 CDS
T09478
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden03420
Nucleotide excision repair
pden03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1C79_24020 (uvrD)
03430 Mismatch repair
F1C79_24020 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pden03400
]
F1C79_24020 (uvrD)
Enzymes [BR:
pden01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1C79_24020 (uvrD)
DNA repair and recombination proteins [BR:
pden03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1C79_24020 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
F1C79_24020 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEY74432
UniProt:
A0A9X7N3D9
LinkDB
All DBs
Position
5192080..5194260
Genome browser
AA seq
726 aa
AA seq
DB search
MNDDISYLLNSLNDPQRQAVAAPLGRQRVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
AVTFTNKAAAEMRARIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLPENFQILDSDD
QLRLVKRVVRELGLDEQRWPPRQAQWFINGQKDEGNRPQNIQAGGDLYLATMVSVYQAYE
EACARAGVVDFAELLLRSLDLWRDRPSLLEHYQRRFRHILVDEFQDTNAVQYAWLRFLGK
GGESLMVVGDDDQSIYGWRGAKIENIQQFGDDFAGTEDIRLEQNYRSTGTILKAANALIA
NNSGRLGKELWTDGVDGDPITLYSGFNEHDEARYIVETIEDALRKDGLKRSDIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNALAYLRLIRLRDDDAALERVINVPPRG
IGEKTVEAIRNAARHNGTSMWRAINDVIAAKAVAGRAASALNAFLETVDLLAVKVEGLPL
HQMTQIVIEQSGLITYHKEEKGEKGQARVENLEELVSAARAFETPDEEDTPPLVAFLDHT
ALESGDTQADAFEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMHRLVMTYAETRRLYGSETYNKVSRFVREIPPSLIQEVRLSNSVSRPLSGNQ
RSGNLFSGASVPDTPFSLGQSVRHPLFGDGVILNFEGSGAQARVQVNFDSEGSKWLMMGY
AKLEAI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgacatctcctacctgctcaactccctcaatgacccgcagcgccaggccgtg
gccgcgccgctggggcgccagcgcgtgctcgctggcgccgggtccggcaagacccgcgtg
ctggtgcaccgtatcgcctggctgatccaggtcgagaacgcctcgccgcacagcatcctg
gccgtgaccttcaccaacaaggccgccgccgagatgcgcgcgcggatcgagcagctgctg
gggatcaacccggccggcatgtgggtcggcaccttccatggcctggcgcaccgcctgctg
cgcgcgcactggcaggaagccgggttgccggagaacttccagatcctcgacagcgacgac
cagctgcgtctggtcaagcgcgtggtgcgcgagctgggcctcgacgagcagcgctggccg
ccgcgccaggcgcagtggttcatcaacggccagaaggacgagggcaaccgcccgcagaac
atccaggccggcggcgacctgtacctggcgaccatggtcagcgtctaccaggcctacgaa
gaggcctgcgcccgcgccggtgtcgtcgacttcgccgagctgctgctgcgctcgctggac
ctctggcgcgaccgcccgagcctgctggagcactaccagcggcgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcttccttggcaag
ggcggcgagagcctgatggtggtgggtgacgacgaccagtcgatctacggttggcgcggc
gcgaagatcgagaacatccagcagttcggcgatgacttcgccggcaccgaggacatccgc
ctggagcagaactaccgctccaccggcaccatcctcaaggccgccaacgcgctgatcgcc
aacaacagcggacgcctgggcaaggagctgtggaccgacggcgtcgacggcgacccgatc
accctgtactcgggcttcaacgagcacgacgaggcgcgctacatcgtcgagaccatcgag
gacgccctgcgcaaggacggcctcaagcgcagcgacatcgccatcctctaccgctccaac
gcccagtcccgcgtgctggaagaggcgctgctgcgcgagaagattccctaccgcatctac
ggcggccagcgcttcttcgagcgtgccgagatcaagaacgccctggcctacctgcgcctg
atccgcctgcgcgacgacgacgccgcgctggagcgggtgatcaacgtgccgccacgcggc
atcggcgagaagaccgtcgaggcgatccgcaacgccgcgcgccacaacggcacctcgatg
tggcgcgcgatcaacgacgtgatcgccgccaaggccgtggccggccgcgccgccagtgcg
ctcaatgcgttcctggaaaccgtcgacctgctggcggtgaaggtcgagggcctgccgctg
caccagatgacccagatcgtcatcgagcagtccggactgatcacctaccacaaggaagag
aagggcgagaaaggccaggcccgggtggaaaacctggaagaactggtcagcgccgcccgc
gccttcgagaccccggacgaagaggacaccccgccgctggtggccttcctcgaccacacc
gcgctggagtccggcgacacccaggccgatgccttcgaggacagcgtgcagctgatgacg
ctgcacagcgccaagggcctggaattcccgctggtgttcctcgccggggtggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggtcgcctggaagaagagcgccgcctg
gcctacgtcggcatcacccgcgccatgcaccgcctggtcatgacctacgcggaaacccgc
cgcctgtacggcagcgagacctacaacaaggtctcgcgcttcgtgcgcgaaatcccgccg
agcctgatccaggaagtgcgcctgtccaactcggtgagccgtccgctgtcgggcaaccag
cgcagcggcaacctgttcagcggcgccagcgtaccggacacccccttcagcctgggccag
tccgtgcgccacccgctgttcggcgacggcgtgatcctcaacttcgaaggctccggcgcc
caggcacgggtgcaggtgaacttcgacagcgagggcagcaagtggctgatgatgggttac
gcgaagctggaagcgatctga
DBGET
integrated database retrieval system
