KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_28630
Entry
F1C79_28630       CDS       T09478                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Pathway
pden00740  Riboflavin metabolism
pden01100  Metabolic pathways
pden01110  Biosynthesis of secondary metabolites
pden01240  Biosynthesis of cofactors
pden02024  Quorum sensing
Module
pden_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pden00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    F1C79_28630 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F1C79_28630 (ribD)
Enzymes [BR:pden01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     F1C79_28630 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     F1C79_28630 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QEY75271
UniProt: A0A9X7N5B5
LinkDB
Position
6140932..6142023
AA seq 363 aa
MSGMDEFWMARAIELARKGWYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQ
AGDKARGATAYVTLEPCSHFGRTPPCADALIGAGLARVVAAMQDPNPQVAGSGMKRIAEA
GIEVRSGVLENEARALNQGFLKRMETGLPFVRVKLAMSLDGRTAMASGESQWITGPAARR
AVQRLRAQASVVLSGADTVLTDDARLTVRPDELGLDAELASRRQPLRVLIDGRLRVPLTA
TFFQAGPALVVSTQDDPNYAVVGHELLNLAGLDGQVDLMALLAELGRRGVNEVLVEAGPR
LAGAFARLGLVDEYSIFMAPKLLGSAARPLLELPLERMSESRELKIVDIRAVGDDWLVTA
RPL
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgagtggcatggatgagttctggatggcccgcgccatcgagctggcgcgcaagggctgg
tacacgacccatcccaacccgcgcgtcggctgcgtcatcgtccgcgatggcgaggtggtc
ggtgaaggctggcacgtgcgcgccggcgagccccacgcggaagtccacgccctgcgccag
gccggcgacaaggcccgtggcgccaccgcctacgtcaccctggagccctgcagccacttc
ggccgcacgccgccgtgcgccgatgcgctgatcggcgccggactcgctcgcgtagtcgcg
gccatgcaggacccgaacccgcaggtcgccggcagcggcatgaagcgcattgccgaagcg
ggcatcgaagtgcgctccggcgtgctggaaaacgaagcccgcgcgctgaaccaaggcttc
ctcaagcgtatggaaaccggtttgccgttcgtccgcgtgaagctggcgatgagcctggac
ggccgcaccgccatggccagtggcgagagccagtggatcaccggcccagccgcgcgccgc
gccgtgcagcgcctgcgcgcgcaagccagcgtcgtgctgtctggtgccgatacggtgctg
accgatgacgcccgcctcaccgtgcgcccggacgagctgggcctggacgccgaactggcc
tcccggcgccagccgctgcgcgtgctgatcgacggccgcctgcgggtgccgctgaccgcc
accttcttccaggccggcccggcgctggtggtgagcacccaggacgatccgaactacgcc
gtggtcggccacgaactgctgaacctcgccggcctcgacggccaggtcgacctgatggcg
ctgctggccgaactcggccgccgaggcgtcaacgaggtgctggtggaggctggtccacgc
ctggctggagccttcgcccgcctcggtctggtggacgagtacagcatcttcatggcgccc
aagctgctcggctccgccgcgcgcccgctgctggagctgccgctggagcgcatgagcgaa
tcccgcgagctgaagatcgtcgacatccgcgcagtgggagacgactggttggtcacggcc
agaccgctgtga

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