Pseudomonas denitrificans (nom. rej.): F1C79_28745
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Entry
F1C79_28745 CDS
T09478
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00550
Peptidoglycan biosynthesis
pden01100
Metabolic pathways
pden01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F1C79_28745 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F1C79_28745 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
F1C79_28745 (mrdA)
Enzymes [BR:
pden01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
F1C79_28745 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
F1C79_28745 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QEY75294
UniProt:
A0A9X7R796
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All DBs
Position
6160060..6161949
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AA seq
629 aa
AA seq
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MPQPIQLKDHEKDARLVRARVIVGGVAIFLLALVLVARMYHLQVTQYDYHSTLSENNRVH
VQPIPPNRGLIFDRNGVIIADNRPSFSLTITRERTENLQETLKTLVEILGLTEEDKAIFE
KRMKQGRRPFEPVPIMFELSEEQIARIAVNQYRLNGVDVAAQFVRHYPLGEHFAHSVGYV
GRINEAELKKLDPVAYSGTHHIGKTGVEKFYEDALHGTVGYEEVETNARGRVLRVLKRTE
PVSGRDIVLSIDSKLQAAAETALAGRRGAIVAIQPSTGEVLAMVSQPAYDPNLFVTGISF
KDYAALRDSEDRPLYNRVLRGLYPPGSTVKPAVAIAGLDAGVVTPSSRVFDPGYYQLPNY
DHKYRNWNRMGDGWVTLETAIMRSNDTYFYDLAHKLGIDRLHDYMSEFGFGQRVALDMYG
EAEGLMPSRQWKRALRRQAWFPGETLILGIGQGYMQATPLQLAQMTALLANKGKWIRPHL
AKTIDGKPPVDEDPMPDIKLKDPNNWNLVDYGMQQVVHGARGTAHKVGATSVYRIAGKSG
TAQVVAIKQGEKYNRSKLLERHRDHALFVGFAPADNPQIAVAVMVENGESGSGVAAPVLK
AVTDAWLLDETGKLKAEYAPQATAEAPKP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgatacagctcaaggaccacgagaaggacgcccgtctggtccgcgcccgc
gtcatcgttggcggggtggcgatcttcctgctcgccctggtgctggtggcgcgcatgtat
cacctgcaggtgacgcagtacgactatcactcgacgctgtcggagaacaaccgcgtccac
gtgcagccgattccgcccaatcgcgggctgatcttcgaccgcaacggggtgatcatcgcc
gacaaccgccctagcttcagcctgaccatcacccgcgagcgcaccgagaacctgcaggag
acgctcaagaccctggtggagatcctcggcctcaccgaggaagacaaggccatcttcgag
aagcgcatgaaacaggggcgccggccgttcgagccggtgccgatcatgttcgagctgtcc
gaggagcagatcgcccgcatcgcggtgaaccagtaccgcctcaatggcgtcgacgtggct
gcgcagttcgtccgccattacccgctgggcgagcacttcgcccactcggtcggctatgtc
gggcggatcaacgaggcggaactgaagaagctcgacccggtggcctattcgggcacccac
cacatcggcaagaccggcgtggaaaaattctacgaggacgcgctgcacggcacggttggc
tacgaggaagtcgagaccaacgcccgcggccgcgtcctgcgcgtgctcaagcgcaccgag
ccggtctccggccgtgacatcgtgctgagcatcgacagcaagctgcaggctgccgcggaa
accgcactggccggccggcgcggcgccatcgtggcgatccagccgtccaccggcgaagtg
ctggccatggtcagccagcccgcctacgaccccaacctgttcgtcaccggcatcagcttc
aaggactatgcggccctgcgcgattccgaggaccgcccgttgtacaaccgcgtgctgcgc
ggcctgtacccgccgggctcgacggtaaaaccggcggtggccatcgccggcctcgatgca
ggcgtcgtgacgccctccagccgagtgttcgaccccggctattaccaactgccgaactac
gaccacaagtaccgcaactggaaccgcatgggcgacggctgggtgaccctggagaccgcg
atcatgcgctccaacgacacctacttctacgacctcgcgcataagctggggatcgaccgc
ctgcacgactacatgagcgaattcggcttcggccaacgggtcgccctggacatgtacggc
gaagcggaaggcctgatgccgtcgcgccaatggaagcgcgcgctgcgccgacaggcctgg
ttccccggtgaaaccctgattctcggcatcggccagggctacatgcaggccacgccgctg
cagttggcgcagatgaccgcgctgctggccaacaagggcaaatggattcgaccgcacttg
gccaagaccatcgacggcaagccgccggtcgacgaggacccgatgccggatatcaagctc
aaggacccgaacaactggaacctggtggactacggcatgcagcaggtagtccatggggct
cgcggcaccgcgcacaaggttggcgccacgtccgtctaccgcattgccggcaagtccggt
accgcgcaggtcgtcgcgatcaagcagggcgagaaatacaaccgctccaaactgctcgag
cgccaccgcgaccacgccttgttcgtcggcttcgcgccggcagacaacccgcagatcgcc
gtggccgtgatggtggagaacggcgagtccggctccggcgttgccgcccccgtgctcaag
gccgtgaccgacgcctggttgctcgacgagaccggcaagctcaaggccgaatacgcaccg
caggccacggcggaggcgcccaaaccatga
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