Pseudomonas denitrificans (nom. rej.): F1C79_28760
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Entry
F1C79_28760 CDS
T09478
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
F1C79_28760
Enzymes [BR:
pden01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
F1C79_28760
Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
F1C79_28760
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Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QEY75296
UniProt:
A0A9X7N5X3
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Position
6164125..6165147
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AA seq
340 aa
AA seq
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MSKRIASPGLWSLAACVGLSTVFLASCTGNRAPQQQPVASSGISGPYDYNRPHRDGAPWW
DVDVSRIPDAVPMPHNGPFKNNPYTVLGKTYYPLNNANTYSVVGTASWYGTKFHGQATAN
GEQYDLYGMTAAHKTLPLPSYVRVTNLDNGKSVIVRVNDRGPFYSDRVIDLSFAAAKKLG
YAETGTAHVKVEGIDPDRWWASQGKQPPMIMALPKMAAQPVAQPQAVAMAQPIETYTPPP
AQHAVPVAPVQIDSKKNASLPADGLYLQVGAFANPDAAELLKEKVGGLTGAKSFISSVVV
NQQTLYRVRLGPIGTQDEASRMQDSIRVANLGQPKLVRLD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaagcgaatcgcaagtcccggcctctggtcgctggccgcctgcgttggcctgagc
accgtgttcctcgccagctgtaccggcaaccgcgcgccccagcagcagccggtggccagc
agcggcatttccggtccctatgactacaaccgcccgcaccgcgacggcgcgccctggtgg
gacgtcgacgtgtcgcgcatccccgatgccgtgccgatgccgcacaacgggccgttcaag
aacaacccctacaccgtgctgggcaagacctactacccgctgaacaacgcgaacacctac
agcgtggtcggcaccgcctcctggtacggcaccaagttccatgggcaggccaccgccaac
ggcgagcagtacgacctgtacggcatgaccgccgcgcacaagaccctgccgctgcccagc
tacgtccgcgtgaccaacctggacaacggcaagagcgtcatcgtccgcgtcaacgaccgc
ggcccgttctattccgaccgggtgatcgacctgtccttcgccgctgccaagaagctcggc
tacgccgagaccggcaccgcccacgtgaaggtagagggcatcgaccccgaccgctggtgg
gcctcccagggcaagcagccgccgatgatcatggccctgccgaagatggccgcgcagcct
gtcgcacagccgcaggcggtcgccatggcccagcccatcgaaacctataccccgccgcca
gcgcagcacgccgtgcctgtggcgccggtccagatcgactcaaaaaaaaacgcttcatta
ccagccgatggcctgtatctccaggtgggtgccttcgccaacccggacgctgcggagctc
ctcaaggagaaggtcggcggcctgacgggggcgaaatcctttatcagctcggtcgtggtc
aaccagcagaccttgtaccgagtgcgcctgggaccgatcggaacgcaggatgaagcaagt
cggatgcaggacagcatccgcgtggccaaccttggccaacccaagctcgtgcgcctggac
tga
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