KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_29660
Entry
F1C79_29660       CDS       T09478                                 
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:pden00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pden03016]
    F1C79_29660 (trmA)
Enzymes [BR:pden01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     F1C79_29660 (trmA)
Transfer RNA biogenesis [BR:pden03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    F1C79_29660 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_4 Methyltransf_12 Cons_hypoth95 Methyltransf_11 MTS PrmA RrnaAD TRM5-TYW2_MTfase DREV Methyltransf_15 DUF3410 Ubie_methyltran
Other DBs
NCBI-ProteinID: QEY75456
UniProt: A0A9X7R7C2
LinkDB
Position
complement(6353201..6354286)
AA seq 361 aa
MSSPRFDPSQYDSQLAEKAARLRELLAPFAAPEPEVFDSPREHYRLRAEFRLWREGEARH
YAMFEQGDKHTPILIEEFPIASQRINELMPRLKAAWAEPTLGHKLFQVEFLTTLAGDAMI
TLCYHRPVDAIWQAAAEKLASELGVSIVGRSRGKRLVVGRDYVSEELTVAGRTFRYRQPE
GAFTQPNGEVCQKMLNWAYEALGQREDDLLELYCGNGNFTLPLATRARKVLATEISKTSV
NAALANLADNAVDNVTLVRLSAEELTQALNDVRPFRRLADVDLKSYAFGSVFVDPPRAGM
DPDTCELTRRFDNILYISCNPETLAQNIAQLHDTHQVSRCALFDQFPYTHHMEAGVLLTR
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagcagtccgcgtttcgatccctcccaatacgacagccaactggccgaaaaggccgcg
cgcctgcgcgagctgctggcgcccttcgccgcgccagagccggaggtgttcgattcgccc
cgcgagcattaccgcctgcgcgccgaattccgcctgtggcgcgagggcgaagcccgccac
tacgcgatgttcgagcagggcgacaagcacacaccgatcctcatcgaagaattccccatc
gccagccagcgcatcaacgaactgatgccgcgcctgaaggccgcctgggccgagccgacg
ctgggccacaagctgttccaggttgagttcctcaccaccctggccggcgacgcaatgatc
actctctgctaccaccgcccggtggacgccatctggcaggctgccgccgagaagctggcc
agtgagctgggcgtgagcatcgtcggccgctcccgtggcaagcgcctggtcgtcggccgt
gactacgtcagcgaagaactgaccgtcgccggccgtaccttccgctaccgccagccggag
ggcgccttcacccagcccaacggcgaggtctgccagaagatgctcaactgggcgtacgaa
gccctgggccagcgcgaggacgacctgctggagctctactgcggcaacggcaacttcacc
ctgccgctggccacccgcgcgcgcaaggtgctggccaccgagatcagcaagacctcggtg
aacgccgccctggccaacctggccgacaacgccgtggacaacgtcaccctggtacgcctc
tctgccgaggagctgacccaggcgctgaatgatgtacgcccgttccgccgcctggccgac
gtcgacctgaagtcctacgcgttcggcagcgtgttcgtcgacccgccgcgcgccggcatg
gacccggacacctgcgagctgacccggcgcttcgacaacatcctgtacatctcctgcaac
ccggagaccctggcgcagaacatcgcccaactgcacgacacccaccaggtgagccgctgc
gccctgttcgaccagttcccctacacgcaccacatggaagccggcgtcctgctgacccgc
cgctga

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