Pseudomonas denitrificans (nom. rej.): F1C79_29675
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Entry
F1C79_29675 CDS
T09478
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00260
Glycine, serine and threonine metabolism
pden00460
Cyanoamino acid metabolism
pden00630
Glyoxylate and dicarboxylate metabolism
pden00670
One carbon pool by folate
pden00680
Methane metabolism
pden01100
Metabolic pathways
pden01110
Biosynthesis of secondary metabolites
pden01120
Microbial metabolism in diverse environments
pden01200
Carbon metabolism
pden01230
Biosynthesis of amino acids
pden01240
Biosynthesis of cofactors
pden04981
Folate transport and metabolism
Module
pden_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F1C79_29675
09102 Energy metabolism
00680 Methane metabolism
F1C79_29675
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F1C79_29675
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
F1C79_29675
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
F1C79_29675
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
F1C79_29675
Enzymes [BR:
pden01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
F1C79_29675
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Ortholog
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QEY75459
UniProt:
A0A9X7R7E7
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Position
complement(6356695..6357948)
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AA seq
417 aa
AA seq
DB search
MFSRDLTLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGITDAGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVLKNAQTMASV
FIERGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFKEAECRELAGWICDILTNMGDESVVDGVREKVKAICAKFPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccctcgcccgctacgatgccgaactcttcgccgcgatggag
caggaagcccagcgccaggaagagcacatcgagctcatcgcctccgagaactacaccagc
ccggcggtgatggaagcccagggttcggtgctgaccaacaaatacgccgaaggctacccg
ggcaagcgctactacggcggttgcgagtacgtcgacgtcgtcgagcagctggccatcgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccgcatgccggctcccag
gccaacgccgctgtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccgttcagtacggcatcaccgacgccggcctgatcgactatgacgaagtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgtcgccggcttctccgcctactcccaggtg
ctggacttcgcccgcttccgcgccatcgcggacaaggtcggcgcctacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtgccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgctgtcttcccgggtgcccag
ggtggcccgctggaacacgtgatcgccgccaaggccgtgtgcttcaaggaagccctgcag
cccgagttcaaggcctaccagcagcaggtcctgaagaacgcccagaccatggccagcgta
ttcatcgagcgcggcttcgacgtggtttccggcggtacccagaaccacctgttcctgctg
tccctgatcaagcaggacattaccggtaaggacgccgacgccgccctgggtcgtgccttc
atcaccgtgaacaagaacagcgtgccgaacgacccgcgttccccgttcgtcacctccggc
ctgcgcatcggcaccccggccgtgaccactcgcggcttcaaggaagccgagtgccgcgag
ctggctggctggatctgcgacatcctgaccaacatgggcgacgagtccgtggtggacggc
gtgcgcgagaaggtcaaggccatctgcgccaagttcccggtttacggcgcctaa
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