Pseudomonas denitrificans (nom. rej.): F1C79_31900
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Entry
F1C79_31900 CDS
T09478
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pden03019
]
F1C79_31900
03009 Ribosome biogenesis [BR:
pden03009
]
F1C79_31900
03036 Chromosome and associated proteins [BR:
pden03036
]
F1C79_31900
Enzymes [BR:
pden01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
F1C79_31900
Messenger RNA biogenesis [BR:
pden03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F1C79_31900
Ribosome biogenesis [BR:
pden03009
]
Eukaryotic type
90S particles
RNase
F1C79_31900
Prokaryotic type
rRNA processing factors
F1C79_31900
Chromosome and associated proteins [BR:
pden03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
F1C79_31900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
QEY75865
UniProt:
A0A9X7R8V2
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All DBs
Position
6864081..6864773
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AA seq
230 aa
AA seq
DB search
MSNNSLDRLERKLGYTFRDQDLMVLALTHRSFAGRNNERLEFLGDAILNFVIGEALFTHF
PQAREGQLSRLRARLVKGETLALLARGFEIGDYLRLGSGELKSGGYRRESILADAMEALI
GAIYLDTGMDSARERIMDWLGPQLRELTPVDTNKDPKTRLQEFLQSRGCELPRYDVVDIQ
GEPHCRTFFVECEVALLNDKTHGHGGSRRIAEQVAAAAALAALGVENGHE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaacaacagtctggatcgactcgagcgcaagcttggctacaccttccgcgaccag
gacctgatggtcctggcgctgacccatcgcagtttcgccgggcgcaacaacgagcgcctg
gaattcctcggtgacgccatcctcaacttcgtcatcggcgaagccctgttcacccacttt
ccccaggcccgcgaaggccagctgtcgcgcctgcgcgcgcgactggtgaagggcgagacc
ctggccctgctggcccgcggtttcgagatcggggattacctgcgactgggctcgggcgag
ctgaagagcggcggttatcgccgcgagtcgatcctggctgacgccatggaggcgctgatt
ggcgccatctatctggacaccggcatggattccgcccgtgagcggatcatggactggctt
ggcccgcaattgcgcgagctgaccccggtggataccaacaaggaccccaagacccgcctg
caggagttcctgcagtcccgtgggtgcgaattgccgcgttacgacgtggtggatatccag
ggcgaaccgcattgccgcactttcttcgtggagtgcgaggtggccctgctgaacgacaag
acccacggtcacggcggcagtcgccgcatcgccgagcaggtggcagccgccgccgcactg
gcagccctgggcgtggagaatggccatgagtga
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