Peteryoungia desertarenae: FE840_004515
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Entry
FE840_004515 CDS
T07298
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pdes
Peteryoungia desertarenae
Brite
KEGG Orthology (KO) [BR:
pdes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdes03032
]
FE840_004515 (gyrB)
03400 DNA repair and recombination proteins [BR:
pdes03400
]
FE840_004515 (gyrB)
Enzymes [BR:
pdes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FE840_004515 (gyrB)
DNA replication proteins [BR:
pdes03032
]
Prokaryotic type
DNA Topoisomerases
FE840_004515 (gyrB)
DNA repair and recombination proteins [BR:
pdes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FE840_004515 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QLF68870
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Position
966915..969350
Genome browser
AA seq
811 aa
AA seq
DB search
MTDTPIMENAEPVEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNADGSVTVTDNGRGIPTDIHSGEGISAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVKLQLKIRRGGKLHEINFTHGVADAPLRVIGEYEGRSGTEVTF
LPSSQTFTKTEFDYGTLEHRLRELAFLNSGVRILLTDKRKPDIRQEEMLYEGGLEAFVRY
LDRSKKPLVEKPVAIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRGA
LTRQVTSYADSSGITKKEKVTLQGEDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWFEEHPTEAKILVGKVVEAAVAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSELFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTSIGKDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVARGKSVQYLKDEKALEDYLISMGLEEATLTLGNGEVRAGPDLRDVISDALR
LRSLIDGLHSRYNRSVVEQAAIAGALNPELTENRARAEETAAQVARRLDLIAEETERGWS
GQVTDEGGLRFERMVRGVKEVALIDVALIGSADARHIDQMNARLREVYAEPPVLSRKDGK
MEISGPRFLLDQIFSAGRKGLSMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVNDATDA
DGLFSRLMGDEVEPRREFIQDNALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgacggatacgccgattatggaaaatgctgagccggtcgaatacggtgctgactcgatc
aaggtcctgaagggacttgatgcggtccgcaagcgccccggcatgtatatcggcgatacg
gacgatggctcgggtcttcaccacatggtctacgaagtggtggacaatgccatcgatgaa
gctttggctggtcatgctgatattgtgactgtcacgttgaatgccgatggctcggtaacg
gtgaccgacaatggccgcggtattccgacggacattcactcaggcgaggggatctccgca
gctgaggtcatcatgacccagctacatgcgggcggcaagttcgaccagaactcctacaag
gtctcgggcggtctgcacggcgttggcgtctctgtcgtcaacgctctttcggtcaagctt
cagctgaagatccgccgcggcggcaagctccatgagatcaatttcacgcatggcgttgct
gacgcacctctccgcgtcattggtgaatatgaaggtcgctctggcaccgaagtcacattc
ctgcccagcagccaaactttcacaaagaccgagttcgactacggaacgctggagcatcgc
ttgcgtgagctcgccttcctgaattccggcgtccggatcctgctgacagataagcgcaag
ccggatattcgtcaggaggaaatgctctatgagggcggacttgaagcctttgttcggtat
ctggatcgctcgaagaagccgctggtcgagaagccggtcgcgatccgcggcgaaaaggat
ggtatcacggtcgaagtggccatgtggtggaatgacagctatcacgagaatgtcctatgc
ttcaccaacaacattcctcagcgagatggcggcacccatatggcgggttttcgtggcgcg
ctgacgcgccaggtcacctcctacgccgatagctcgggcatcacgaagaaggaaaaggtc
acgcttcagggcgaagactgccgcgaaggcctgaccgctgtcctttcggtcaaagtacct
gacccgaagttctcgtctcagacgaaggacaagctcgtatcgtcagaagtgcgtccggtc
gtcgagagtctggtaaacgaagcactcagcacctggtttgaggaacatccgacggaagcc
aagatccttgtgggaaaagtcgttgaagcagctgtcgcacgcgaggcagcgcgcaaggcg
cgtgaactgacgcgccgaaagggtgcgctcgatattgcatctctgccaggcaagctcgct
gactgctcggaacgtgacccggctaagtcagagcttttcctcgttgagggtgactccgca
ggtggttctgcaaagcagggtcgctcgcgcgaaaatcaggcgatcctgccgcttcggggc
aagatcctgaacgtggaacgtgcccgtttcgacaagatgttgtcgagccaggaaatcggg
acattgattaccgcgcttggcacctcgattggcaaggacgagttcaatgccgacaagttg
cgctaccacaagatcatcatcatgaccgatgctgacgtggatggcgctcatatcagaacc
ctgcttctgaccttcttctttcgtcagatgccggaattgatcgaacgtggccatctctac
atcgcccagccacctctctataaggtagcccgtggcaagtccgttcagtatctcaaggat
gagaaggcgcttgaggactatctgatttcgatgggtcttgaagaagcgaccctgacactc
ggcaatggtgaggtccgcgccggaccggacctgcgggacgtgatcagtgatgctctgcgt
ctgcggtcactgattgatggtcttcattcacgctacaatcgcagcgttgtcgaacaggcg
gcgatcgccggagcgcttaatcctgagctgaccgaaaacagggcccgggcagaagaaacg
gcggcccaggtcgctcgccgcctcgacctgatcgcagaagaaaccgagcggggctggagc
ggtcaagtgacggacgaaggtgggctgcgtttcgagcgtatggttcgcggcgtcaaggaa
gttgcattgattgatgtcgcattgatcggatctgcagatgcccgccacatcgaccagatg
aacgcccgcttgcgcgaggtctatgctgaaccgccggttctttcgcgcaaggatggaaag
atggagatttcaggtccgaggttcttgctcgaccagatcttctcagctgggcgcaagggt
ctctccatgcagcgctataagggcttgggtgaaatgaacgcggaacagttgtgggagacg
acgctggaccccaatgtccgctctctgctgcaggtgaaagtcaacgacgcgaccgatgca
gacggtctgttctcgcgcctgatgggtgatgaggtcgaaccgcgacgggagttcattcag
gacaacgcgctaagcgttgcgaatctggatatctga
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