Peteryoungia desertarenae: FE840_004570
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Entry
FE840_004570 CDS
T07298
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pdes
Peteryoungia desertarenae
Brite
KEGG Orthology (KO) [BR:
pdes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdes03400
]
FE840_004570 (addA)
Enzymes [BR:
pdes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE840_004570 (addA)
DNA repair and recombination proteins [BR:
pdes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FE840_004570 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
NPHP3_N
nSTAND_NTPase5
DEAD
AAA_30
Exo5
Motif
Other DBs
NCBI-ProteinID:
QLF68878
UniProt:
A0ABX6QJZ6
LinkDB
All DBs
Position
complement(978638..982192)
Genome browser
AA seq
1184 aa
AA seq
DB search
MTTEVTSPSPGSNSSQWLDWTTLQQSTASHPERSAWVSANAGSGKTHVLTQRVIRLLLAG
ARPSSILCLTYTKAAASEMSNRVFDRLAAWVTLTDEELAKRIYQIERIEPDRETLAKARR
LFARALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAATAVLAEARRSLLTA
TSSEDNEELAEAFAEVLSIADDTGLEVLLSDIVANRLAIRRFRAAAERQGGMEQVLRKRL
SLSEEETEESIAASGWPMAGLAGSELTQYIELAAEKAGEKVRAIADALALANAEENPLLR
FRHLETAFLTASEAPKADSTLIAAAMTKVAPALKDAVIAARDHFVIIRDRLRIFRMYKAT
RTALVLATRLDEDYEALKKRRSQLDFEDLIARTADLLMRADVGAWVHYKLDQGIDHILVD
EAQDTSPVQWSVIRSLREDFFVGEGARDSLRTFFAVGDEKQSIYSFQGARPERFSLEAGE
TAKAVAQGGQLFSSIRLPLSFRSTATVLSAVDQVFSVPDNARGLSPSGDQIEHMSNRTGH
PGTVDVWDLIIAEKQVRDEDWTAPFDSTPESAPSAILARRMAYRIGEMIGRETVIEDGKE
RPIRPGDILVLVRKRDSFVNALTRALKRNGNIPVAGADRLKLTSHIAVQDLLALGRFVLL
PADDLSLAALLKSPLFNHSEDQLFELAAYRKRDESLWVRLQNMKDKSGSNWTKTVQTLEL
FLSMAARYSAHDFYARVLGVHGGRKAYLARLGGEVSDILDEFLTFALSFETASLPGLQAF
VSTLELEAPEVKREQDKERDEVRIMTVHASKGLEAPVVFLVDGGSKAFNHSHLSKLRLLD
DRPDRLALPVWLPSKALSNSVIEEDTAARQIATEEEYRRLLYVAMTRAADRLVICGYRGV
QDTGEIWHRMVSTALSKDESRCKPAEFSGPDGSWTGLSWRIEDPVKVLPAEDRAESASKC
QTLPASLLEALPPTRALPRPLSPSGAGSLIIEDEDEVVTASALFDRSTSGEIALQRGRLI
HRMLQSLPGVPPADRAKAAERYAERAAGAWSAGERQGLVESVLSVLDHPDLADVFGAKSK
AEVSIMGTMSLRGELRAVSGRIDRLAVLDRRILVLDYKTNRQVPATETEVPLAHRAQLAI
YREILKPLYPDSAIHCMLVYTENGSVIPLSDAVLCQSLADLETS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgaggtcacgtcaccctcccccggctccaattcgtctcaatggcttgactgg
acgaccttgcagcaatcaacggcatcgcatcccgaacgctcggcctgggtgtcggccaat
gcgggttccggcaagacccatgtgctcacacaacgagtcatccggctacttctggcgggt
gcgcgcccctcctcgattctgtgcctgacctatacgaaggctgccgcatcagaaatgtcg
aaccgcgtctttgaccggctggcagcctgggtgacgctgacggacgaggagctggcaaag
cgcatctatcagattgagcgcatagagcccgatcgagagacgctggcgaaagcacgaaga
ctgtttgcgcgcgccctggaaacgccaggcggattaaagatccagacaatccacgcgttt
tgcgaagcgctgctgcaccagtttccgctggaggccaatgtcgccggccatttctctgtt
ctcgatgatcgggccgcgacagccgtgctggcagaagcacgccgctcgctgctgacggca
acatcgtccgaggacaatgaagaactcgcggaagcctttgccgaggtgctgtcgattgcg
gacgacacggggctcgaagtgcttttgtccgatatcgtggccaatcggctggcgatacgc
cggtttcgagcggctgccgaacgtcaaggcgggatggaacaggtgctgcgcaaacgcctg
tcgcttagtgaggaagagaccgaagagagcatcgcggcttccggctggcctatggcaggt
ctcgcaggctctgaactgacacagtatatcgagctagcggcggagaaggcaggcgaaaag
gttcgcgccatagccgatgcccttgcactggcaaatgccgaagagaacccgctcctgcga
ttccgacatctggaaacggctttcctgacggcgtccgaggctccgaaagcagacagcacc
ctgattgcagcggccatgaccaaggttgcgccggcactcaaggacgctgtaattgcggcc
cgtgaccactttgtcatcattcgggaccggctgcggatcttccggatgtataaggccaca
cgtaccgctctcgtcctcgccacgcgattggatgaagactacgaagccctgaagaagcgc
cggtcgcagctcgatttcgaggatctgattgcccggaccgctgatcttctcatgcgcgcc
gatgtcggtgcctgggtgcattacaagctggatcagggcattgaccacatccttgtggat
gaggcgcaagataccagtccggtccaatggtcggtgatccgttcgctgcgcgaggatttc
tttgtcggcgaaggcgcaagggacagtttgcggaccttctttgcggtcggggatgagaag
cagtcgatctactcctttcagggggcaagacccgagcgcttttcgctggaggctggggaa
accgccaaggcggttgcccagggcggacagttgttcagcagcatccggctgccattgtcc
ttcagatctacggccacagtgctctctgcggtggaccaggttttcagcgttcccgataat
gccagggggcttagcccttcgggcgatcaaatcgagcacatgtcgaaccggacaggccat
cccggtacggtcgacgtctgggatctgatcatcgccgagaaacaggtgcgcgacgaggac
tggacagcgcccttcgattcgactccggaaagcgcaccttctgccatcctcgcgcgacgg
atggcttaccgaatcggcgaaatgatcggtcgcgagaccgttatcgaagacggcaaggag
cgcccgatccggccgggtgacattctggttctggtccgcaagcgcgacagtttcgtcaac
gctctgacgcgggccttgaagcgcaacggcaatatcccggtcgccggggccgaccgcctg
aagctgacatcccatattgccgtgcaggacctgctcgcactcgggcgtttcgtcctgttg
ccagcggatgatctctcacttgcggctctcctgaaaagccccctgttcaatcactctgaa
gatcagctttttgaactcgccgcctatagaaagcgggacgaatcgctctgggtacgactg
caaaacatgaaggacaagtcgggctcgaactggaccaagaccgtccagacgcttgagctt
tttctgagcatggctgcgcgttactcggcacatgacttctatgcccgggtgcttggcgtt
catggcgggcgcaaggcctatcttgcgcggcttggaggcgaagtcagcgatattctcgat
gagttcctgacctttgccctgtccttcgaaactgccagtctgccaggtctccaggccttt
gtttcgacgctcgaacttgaagcgccagaagtgaagcgtgagcaggacaaggagcgggac
gaggtgcgcatcatgacggtgcatgcgtccaagggtcttgaggcgccggtggtcttcctc
gtggatggaggctcgaaagccttcaatcacagccatctttcgaagctgcgcctcctggat
gataggcctgatcgcctggcgctgcccgtctggctaccatcgaaagcactctccaactcg
gtgattgaagaggatacggcagccagacagatcgcaaccgaggaagagtatcgccggctg
ctttatgtcgcgatgacgcgagccgctgacaggttggtcatttgtggctatcgcggcgtt
caggatacgggtgagatctggcaccgcatggtgtctacagcgctgtccaaggatgaaagc
cgctgcaaaccggcagagttttcagggccggacgggtcatggaccggcctgagctggcgg
atcgaagatcccgtgaaggttttgccggcggaggatcgggcggagagtgcttcaaagtgc
cagaccttgccggcttcgctactggaggctctgccacctaccagggccctgccccgtccc
ttgagcccatcgggcgctggcagtctgatcattgaggatgaggacgaagtggttaccgct
tcggccctgttcgatagatcgacatccggcgaaatcgcgctgcaacggggacgactgatc
catcggatgttgcaaagcctgccaggcgttcctccagcggacagggccaaggctgccgaa
cgctatgcggagcgtgcagctggtgcctggtcagccggtgagaggcagggtctggtggag
tcggtactgtcagttctcgaccatcccgatcttgccgatgtctttggtgcaaaaagcaag
gcggaggtctccatcatgggaacgatgagccttcgcggagagttacgcgcggtatcggga
cggatcgaccgcctcgccgtactcgacaggcggatcctggtgttggattacaagacgaac
cggcaggtgcctgccactgaaacggaggtgccgcttgcgcatcgtgctcaactggccatc
tacagggagatcctgaaacctctttatccagatagcgccattcattgcatgcttgtctac
acagagaatggaagcgtgattccgctttcggacgccgtcttgtgccaatcccttgccgac
ctcgagacatcgtga
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