Peteryoungia desertarenae: FE840_005275
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Entry
FE840_005275 CDS
T07298
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdes
Peteryoungia desertarenae
Brite
KEGG Orthology (KO) [BR:
pdes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdes03016
]
FE840_005275 (truB)
Enzymes [BR:
pdes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FE840_005275 (truB)
Transfer RNA biogenesis [BR:
pdes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FE840_005275 (truB)
Prokaryotic type
FE840_005275 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QLF68999
LinkDB
All DBs
Position
complement(1134182..1135111)
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AA seq
309 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPMDFGSTEAVGKIKWLFNAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERSTDDLEGEVTHSSDKRPAEEEVRALLPRYTGVI
QQIPPQFSAIKIAGERAYDLAREGEAVEIPSREVKVHRLTLLKAEKDRAFFEVECGKGTY
VRSLARDFGRDLGCYGHISELRRSFVAPFAEETMVPLEKLVALEALEDREERLAALDAFL
VDTSEALSALPQIRISDDQAHRLKMGNSIILRGRDAPVAEPEAVALAGGRLIAIGEIAGG
EFHPRRVFG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccccgcaagcccaagggccgcccgatttcgggctggctcattctagacaag
ccgatggatttcggctcgaccgaggccgtcggcaagatcaaatggctcttcaacgcccag
aaagccggtcacgccgggacgctcgacccgctcgcctccggcatgctgccaattgcactg
ggcgatgcaacaaaaaccgtcccttacgtgatggatggtcggaagatctacgaatttacc
gtcacctggggcgaagagcgttcgacggatgaccttgaaggcgaagtcacgcatagttct
gacaagcggcccgccgaagaagaggttcgcgcgctgctgccgcgctacacgggggtcata
caacagatcccgccgcagttctctgcaatcaagatcgccggcgagcgcgcctatgatctg
gcccgagagggcgaagccgttgaaattccttcgcgtgaagtaaaggttcatcgcctcacc
ttgctaaaggcggaaaaggatcgtgccttcttcgaggtggaatgcggcaagggcacctat
gtccgatcgctcgcccgtgatttcggtcgcgatctcggctgctacggccatatctcggaa
ctcaggcgcagcttcgtggctccctttgccgaggagacgatggtgccgttggaaaagctc
gtcgcgcttgaggcgctcgaagaccgcgaagagcggcttgcagcgctggacgcctttctc
gtcgacaccagcgaggccttgtccgccttgcctcagatacgcatcagcgacgatcaggcc
caccggctgaaaatgggcaattccatcatcctgcgcggtcgcgacgctccggtcgcggag
ccggaagccgttgccctggccggtggtcggctgattgcgattggcgagatcgccggtggc
gaatttcatccgcgacgggtcttcggttaa
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