Peteryoungia desertarenae: FE840_005445
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Entry
FE840_005445 CDS
T07298
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pdes
Peteryoungia desertarenae
Pathway
pdes03030
DNA replication
pdes03410
Base excision repair
pdes03420
Nucleotide excision repair
pdes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE840_005445 (polA)
03410 Base excision repair
FE840_005445 (polA)
03420 Nucleotide excision repair
FE840_005445 (polA)
03440 Homologous recombination
FE840_005445 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdes03032
]
FE840_005445 (polA)
03400 DNA repair and recombination proteins [BR:
pdes03400
]
FE840_005445 (polA)
Enzymes [BR:
pdes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE840_005445 (polA)
DNA replication proteins [BR:
pdes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FE840_005445 (polA)
DNA repair and recombination proteins [BR:
pdes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FE840_005445 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE840_005445 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QLF69030
LinkDB
All DBs
Position
1168385..1171366
Genome browser
AA seq
993 aa
AA seq
DB search
MKKGDHLFLIDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLTDARDTSVGVT
PTHLAVIFDYSSTTFRKEIYPEYKANRSAPPEDLVPQFGLIRHATRAFNLPCIETEGFEA
DDIIATYARAAEAIGADVTIVSSDKDLMQLVTPNVHMYDAMKDKQIGIPDVIEKWGVTPD
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEFGDLETLLARAGEIKQVKRRENIIANA
ELARISRKLVELRTNVPLDMALDQLTLEKQDGAKLIAFLKAMEFTTLTRRVAEACDCDAA
AIEPAAVPVEWGEEARGPDLDKGDAATEQKAAASETANTEVSDKQDLEGNKPSELARTRA
EAFASHPIDRTRYVTIRDIATLQAWIAEARETGLVAFDTETTSLDPMQAELVGVSLALQD
NRTSPASAMIKAAYVPLAHKTGVGDLLGGGHAENQIPMGEALSALKDLLEDPSVLKIAQN
LKYDYLVMKRHGIVIQSFDDTMLMSYVLDAGKGNHGMDGLSEKWLGHTPIAYKDVAGSGK
SAVTFDLVDIDKATAYAAEDADVTLRLWLVLKPRLVAEGLTRIYERLERPLVPVLAEMEE
RGITVDRQILSRLSGELAQKAAAAEDEVYELAGERFNIGSPKQLGDILFGKLGLPGGSKT
KTGQWSTSAQVLEDLAAEGAPLPRKIVDWRQLTKLKSTYTDALPGYIHPVTKRVHTGYSL
ASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVLAHVADIP
QLRQAFADGVDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLGIER
SEAGDYIKKYFERFPGIKDYMESTKAFAREHGYVETIFGRRAHYPEIKSSNPSMRAFNER
AAINAPIQGSAADIIRRAMIKIEPALAAAGLAEQVRMLLQVHDELIFEVEDGAIDKVLPV
IVSTMEQAAMPAISMRVPLKVDARAAQNWDEAH
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcattgacggctccgggttcatcttccgtgccttc
catgcaatccccccgctcaaccgcaaatcggatggcttgccggtcaatgccgtgtcgggt
ttctgcaatatgctgtggaagcttctgactgatgcaagagacacgtcggtcggtgtcacg
ccgacgcatctggcggtgattttcgactattcgtcaacgacgttccgcaaggaaatctac
cctgaatacaaggcaaaccgctccgcaccgccggaggacctcgtgccgcaattcggcctg
atccgccatgctacccgcgccttcaatctgccgtgtatcgagaccgaaggcttcgaggcc
gacgatatcatagccacttacgcaagggccgccgaggcaatcggggccgatgtgaccatc
gtttcgtctgacaaagacctgatgcagttggtgaccccaaatgtgcatatgtatgacgcc
atgaaggacaagcagatcggtattccggacgtcatcgaaaagtggggcgtgaccccggac
aagatgatcgatctgcaggctatgaccggtgactcgaccgacaatgttccgggtatccca
ggcattggtccaaagacagccgctcagcttctcgaagaattcggcgaccttgaaacgctc
ctcgcccgggctggcgagatcaagcaggtcaagcgccgcgaaaacatcatcgccaatgcc
gagcttgcccgcatttcccgcaaactggtggagctcagaacgaatgttccgctcgacatg
gcactggatcaactgaccctggaaaagcaggatggtgcaaaactgatcgccttcctaaaa
gccatggaattcaccacgctcacccggcgcgtggcagaagcctgcgattgcgacgccgcc
gccattgagccagccgcagtacctgtcgagtggggtgaggaggcgcgcggtcctgacctc
gataagggggatgctgcaacggaacaaaaagctgcggcgagcgagactgcgaatacggag
gtctcggacaagcaggatctggaaggcaacaaaccgtctgagcttgccaggacccgtgcg
gaagcctttgcttcccatccgattgaccgcacgcgctatgtgacgatccgcgatattgcg
acgcttcaggcctggattgcggaagcgcgtgagaccggcctcgtggcatttgatacggaa
accacctcgctcgatccaatgcaggccgagctcgttggcgtatcgctcgcattgcaggat
aaccggacctcgccagcatcagcgatgatcaaggccgcttatgtgccgctcgcccacaag
acgggtgtcggcgatctcctgggcggtggtcatgcggaaaaccagatccccatgggtgag
gcgctctcggcgctgaaggatctgttggaggatccgtccgtcctgaaaatcgcccagaac
ctgaaatatgattaccttgtcatgaagcgccacgggatcgtgatccagagcttcgacgac
accatgctgatgtcttatgttctggacgcgggcaaaggcaatcacggtatggacggactt
tcggaaaagtggctcggccatactccgatcgcctacaaggatgtcgccggatcgggcaag
tccgccgtgaccttcgatctggtagacatcgacaaggcaaccgcctacgcggctgaggat
gccgatgtgacccttcgtctgtggcttgtcctgaagccgcgccttgtcgctgaaggtctg
acccgcatctacgagcggctggaacgtccgcttgtacccgtgctcgccgagatggaggaa
cgcgggattaccgtcgaccgccagatcctctcgcgtctctccggtgaattggcgcaaaag
gccgccgctgccgaggacgaggtctatgagcttgccggcgagcggttcaatatcggctcg
cccaagcagcttggagacatcctcttcggcaaactaggtctgccgggaggctccaagacc
aagaccggccaatggtccacctccgcccaggttctcgaagatctcgccgccgagggtgcg
cctttgccgcgcaagatcgtcgactggcgccagctgaccaagctcaaatccacttacacc
gatgcgcttccgggttacatccatccagtaaccaagcgagtccacaccggctattcgctc
gcctcgacgaccactggccggctgtcatcgtccgagccgaacctgcagaacatccccgtc
cgcaccgccgaaggccgcaagatccgtacggccttcatttcgacgccgggccacaagctg
ctgtccgccgactacagtcagatcgaactgcgtgtgctcgcccatgtcgccgacataccg
cagctgcgtcaggctttcgccgatggcgtcgatatccatgccatgacggcgtcggaaatg
ttcggcgtgccggtcgaaggcatgccgtcggaagtccgccgccgcgccaaggcgatcaac
ttcggcatcatctacggcatttccgccttcggccttgccaaccagcttggcatcgagcgt
tccgaagcaggcgattacatcaagaagtatttcgagcgcttccccggcatcaaggactac
atggagagcaccaaggcctttgcccgcgagcacggctatgtcgaaaccatcttcggtcga
cgggcccactacccggagatcaagtcatcgaacccgtccatgcgcgccttcaacgagcgc
gccgcgatcaacgcgccgatccagggctccgctgccgatatcatccgccgggccatgatc
aagatcgagcctgcccttgccgcggccggtcttgccgaacaggtgcgcatgctgctgcag
gtccatgacgaactgatcttcgaggtcgaggatggggcgatcgacaaggtcctgccggtc
atcgtctccaccatggaacaggcggccatgccggcaatatcgatgcgcgttccgctgaag
gtggatgcccgcgctgcacagaattgggatgaagcgcattag
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