Peteryoungia desertarenae: FE840_015375
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Entry
FE840_015375 CDS
T07298
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdes
Peteryoungia desertarenae
Pathway
pdes03420
Nucleotide excision repair
pdes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FE840_015375
03430 Mismatch repair
FE840_015375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdes03400
]
FE840_015375
Enzymes [BR:
pdes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE840_015375
DNA repair and recombination proteins [BR:
pdes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE840_015375
MMR (mismatch excision repair)
Other MMR factors
FE840_015375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3553
DEAD
Motif
Other DBs
NCBI-ProteinID:
QLF70809
UniProt:
A0ABX6QQN0
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All DBs
Position
3149314..3151794
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AA seq
826 aa
AA seq
DB search
MSNGFDDIPFFDEEPAPRKPVAGSKVPPAPGAGLGIAARAMAARDQARMPDYLSGLNPEQ
REAVESVDGPVLVLAGAGTGKTRVLTTRIAHILASNRAFPSQILAVTFTNKAAREMKERI
GHLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLSSDFTILDTDDVVRLIKQIIQAEGLD
DKRWPAKQFAAMIDGWKNKGLDPARVPEGDARAFGNGKGRELYVAYQNRLKTLNACDFGD
LLLHPIRMFKANPDVLKEYHQRFRYILVDEYQDTNTAQYMWLRLLAQRPEGVPQNVCCVG
DDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKT
LFTDRIDPNDDKVVVHAAWDSEEEARAVGEEIEQLQRQQHPLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAAADIIETDELKPKARKALFDVVTDFRRWQSLLENTPHTELAEQIL
DESGYTAMWHNDKSAEAPGRLENLKELIRSMEAFESMRGFLEHVSLVMDAETNENLDAVS
IMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKRRCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVEVAETETSYGGYGRNPYGQSRFDKQEPFQNSY
STPGWKRAQANRTDATRDNWGTRSGHAVERIGYGESGPRAKTIEGELVAKSTTTEPSRFS
VGDRVFHLKFGNGNIASIEGNKLTIDFDRAGQKRVLDGFVERVQAS
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatggatttgatgacattcccttctttgatgaagagcccgcgccgcgcaaaccc
gtagccggtagcaaagtgccccctgcaccgggtgcaggtcttggcattgccgcccgcgcc
atggctgcacgggaccaggcgcgcatgcctgattatctgtcgggactcaatccggaacag
cgggaagcggtcgaatctgttgacggcccggttctggtgcttgccggtgccggcaccggc
aagacccgcgtgctgacaacccgtatcgcccatattcttgcaagcaatcgcgcctttccg
agccagatccttgcggtgactttcaccaacaaggctgcccgagagatgaaggagcgcatc
ggccatcttgtcggcggcgcggttgagggaatgccctggctcggcacctttcactcgatc
ggcgttaagctcctgcggcgacacgcggaactcgtcggcctttcctccgacttcaccatt
ctcgataccgacgatgtggtgcgcctgatcaagcagatcatccaggccgaagggctggat
gacaagcgttggccggccaagcagtttgccgcgatgatcgatggctggaagaacaagggc
ctcgatccggcgcgagtacccgaaggtgatgcaagagcctttggcaacggcaaggggcga
gaactctatgttgcctaccagaaccgcctgaagaccctgaatgcctgcgatttcggagat
ctgctgctgcatcctatccggatgttcaaggcaaatccggatgtgctgaaggagtatcac
cagcggttccgctacatcctggtggacgagtatcaggacaccaataccgcccaatacatg
tggctgcgcctgctcgcgcagcgcccggagggcgtgccgcagaatgtctgctgtgttggt
gatgacgatcagtcgatctatggctggcgtggcgcggaagtggacaacatcctgcgcttc
gaaaaggatttcccgggcgccaaggtgatcaagctggagcgcaactatcgctccaccgag
catatcctcggcgccgccggccacctgatcgcccataacgagggcaggcttggcaagacg
ctgtttacggatcgcatcgatccgaatgacgacaaggttgtcgtgcacgcggcctgggat
tcggaagaagaagcccgcgcggtcggcgaggaaatcgaacagttgcagcgccagcagcat
ccgctgaacgacatggcgatcctggtgcgcgcctccttccagatgcgcgagttcgaagat
cgcttcgtcaccctcggtctgaattaccgcgtcattggcggcccgcgcttctatgagcgg
ctcgagatccgcgatgcgatggcctatttccgcctcgtctgccagccggcagacgacctc
gccttcgagcgcatcgtcaacacgccgaagcgcggcctcggcgatacgacgatccgcaat
cttcatgactatgcccgcgcccgcgacattccgatgcttgcggcagcggccgacatcatc
gagacggacgagctgaagccgaaggcccgcaaggcgctcttcgacgtcgtcacggatttc
cgtcgctggcagtcgctgctcgaaaacacgccgcataccgagctcgccgaacagatcctc
gacgagagcggctacacggccatgtggcataacgacaagtctgccgaagcgccgggccgg
cttgaaaacctgaaggaactcatccgctcgatggaagccttcgaaagcatgcgtggcttc
ctcgaacatgtctcgctcgtcatggatgccgagaccaacgagaatctcgatgccgtatcg
atcatgacgctgcattcggccaagggtctcgaattcgagaccgttttcctgcccggctgg
gaggaaggtctcttcccgcaccagcgggcgctggatgaaggcgggcgtagcggattggaa
gaagaacgacgcctcgcctatgtcggcatcacccgcgcaaagcgccgctgccacatctgg
tttgtgtcgaaccgccgcatccacggcctctggcaatccaccctgccctcgcgcttcctg
gacgaactgccgcccgcccatgtcgaggtcgctgaaacggagacctcctatggcggctac
ggccgcaacccctacggccagtcccgtttcgacaagcaggaaccctttcagaacagctat
tcgacgcccggctggaagcgtgcccaggccaacaggaccgacgccacccgcgacaattgg
ggcacgcgctccggccatgcggtcgagcggatcggctacggtgaaagcggaccccgcgca
aagacgatcgaaggcgaactcgtcgcgaaatcgacgacgaccgagccgtcacgcttctcg
gtcggcgatcgcgttttccatctcaagttcggtaacggcaacatagcatccatcgaaggc
aacaagctgaccatcgatttcgaccgggctggccagaagcgtgtactggatggttttgta
gaaagggttcaggcctcctga
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