Peteryoungia desertarenae: FE840_020625
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Entry
FE840_020625 CDS
T07298
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdes
Peteryoungia desertarenae
Pathway
pdes03420
Nucleotide excision repair
pdes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FE840_020625
03430 Mismatch repair
FE840_020625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdes03400
]
FE840_020625
Enzymes [BR:
pdes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE840_020625
DNA repair and recombination proteins [BR:
pdes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE840_020625
MMR (mismatch excision repair)
Other MMR factors
FE840_020625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QLF72045
LinkDB
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Position
pPRADMK78_02:695..2431
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AA seq
578 aa
AA seq
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MTTEAPSPAVIAAQDAQDRLEKCLGLGKNFRLEAGAGAGKTYSLVAALKRLVTERGAALM
QAGQQIACITYTEVARNEIAQEIEEHPAILVNTIHGFGWSFISRFQKQLRALVAAQDSRQ
EAITAAGGIHNQIVEYNLGFFDIDSKRITLQHDDVPRFLASLLANAKFQRIFQSLYPIVF
IDEYQDTDPLVMSALAENFFVTGTGPVIGLFGDHWQTIYRKDYQLADFANVEGIDKGSNF
RSVAAIVDVLNRLRPELTQSVHDEATKGEARFFHCNAYAGARTDSVHAKRELPPEISVKF
IESLKNTLIADGWDLDPRRTKILILTHNAIAAERGYPNLADIFDRKESFVKKEDATIAFL
ADTVEPVCNAYAVGNFGEMFRLLGGIPTIRRPADKTELRSQMDKLIELRKSGTIGEVLDY
LKQIKRPRLTDRVASREEEIAALGPDETEEESNSLKRHRKLRNVHYKEIVALVEFINGFT
PFATQHSVKGAEFENVLVILSGGWNHYNWPKYLELRHTGIIPAKDQGGYYRARNLFYVAI
SRPKKRLAVLATQELSATALASAVDLFGSEHVHALPIP
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagaagcaccatcaccggcagttattgcagctcaagatgctcaagaccgcctt
gaaaagtgtcttggattgggtaaaaacttcaggcttgaagctggagcaggcgcgggcaag
acctattccctcgtagccgcgcttaaaaggcttgttactgaacgtggtgcggccctaatg
caagctggccagcagattgcctgcatcacctacacagaagttgctcgcaacgagatcgcg
caggagatcgaggaacacccagcgatcctcgtaaacaccattcacggctttggatggtcg
ttcatatctcgcttccagaaacagcttagggccctggtagcagcgcaagattcgcgacag
gaagcgattaccgctgcaggcggcattcacaatcagatcgtcgaatacaacctcggtttt
ttcgacattgatagtaagcggatcacgctacaacatgacgacgtgccccgttttctcgct
agtttgttggcgaatgcgaagttccagcgcatttttcagagcctttatccaattgtgttt
atcgacgagtaccaggatactgatccactcgtgatgagcgcgctcgcagaaaacttcttc
gtaactggcactggacctgttatcggcctttttggcgaccactggcaaacgatttatcgc
aaggactaccagctcgccgattttgccaatgtcgagggtatcgacaagggttcaaacttc
cgctcggtcgctgcaattgttgatgtgctcaaccgtcttcgcccggagctcacccaaagt
gtccatgacgaagccacgaaaggcgaggctcgtttcttccactgcaacgcctacgccgga
gcacgtacggattctgtgcatgccaagcgagaactgccgccagagatctctgttaagttc
atcgagagtctgaagaacacgcttatcgctgacggttgggatctagaccctaggcggacc
aaaatcctgatactaacccataacgccatcgccgcagaacgcggctaccctaatctcgcg
gacatatttgaccgcaaagaatcgtttgtaaagaaagaggatgctacaattgcgtttctc
gccgacacagtagagccggtctgtaacgcgtatgcggtcggcaatttcggagagatgttc
cgcctccttggcggcattccgacaatcaggcggccagcagataagacggaattgcgctct
cagatggacaaactcatcgagctgcgaaagagcggcacgatcggtgaggtgctggattac
ctaaagcagatcaaacgaccgcgtcttaccgacagagttgcaagtcgcgaagaggaaata
gctgctctcggacctgatgagaccgaagaggaatccaactcgctcaagcgccatcgaaag
ctccggaacgtccactacaaggagatcgtcgcgcttgtcgagttcattaacggcttcaca
ccgttcgccacacaacatagcgttaaaggagcggagttcgagaatgtcctagtgattctg
agcggcggctggaaccactataactggccaaagtaccttgagcttcggcatactgggata
attcctgcgaaggatcaaggcggttactaccgtgcccgaaaccttttttatgttgcaatc
tcccgaccgaaaaagcggctcgcagttcttgctacgcaggagcttagcgcaactgcactg
gcatcggcggtcgatctgttcggcagtgagcatgttcacgcacttcctattccgtaa
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