Pseudomonas defluvii: QEP73_02105
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Entry
QEP73_02105 CDS
T10501
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pdeu Pseudomonas defluvii
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdeu03000
]
QEP73_02105
Transcription factors [BR:
pdeu03000
]
Prokaryotic type
Helix-turn-helix
Other families
QEP73_02105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
PAS_4
PAS_9
AAA_2
HTH_22
HTH_23
AAA
HTH_AraC
HTH_17
HTH_50
HVO_A0261_N
HTH_7
RWP-RK
PAS_8
TrmB
IclR_C
HTH_30
HTH_20
HTH_28
DUF7317
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
WJM96943
LinkDB
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Position
complement(458244..460169)
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AA seq
641 aa
AA seq
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MQSNHLSRHARQVLTVTQGKAHLQGPGSDPSIARSWLRCLEDYHLDPAMAMAPTVLEHGR
LLESRERLQQVLQIAGNEMNTLHQQLSGAGHAVLLTDARGVILNCVTAPTERKIFERAGL
WLGADWSEASEGTNGIGTCLVERQAVTIHQEEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSARPEVSRQSQFHTMALVNLSAKMIESCYFLRHFENQWLLRFHLQAESVGLFSEGLLA
FEGDGRICAANQSALNLLGHVRGGLLGKPVEMFFECSLDELLGRATAQANASWPLRTRDG
RQLFASVRGQVRAPQPSSLAAVALPPPAPITGSICLVDPALQNDFRRAVRVFERDVPLLL
NGETGCGKEAFAKAVHQASQRAAKPFVALNCASIPESLIESELFGYRGGSFTGARKEGMR
GKLQQADGGTLLLDEIGDMPLALQTRLLRVLEERRVVPIGGEPQAVDVRIISATHRNLLE
RVEDGSFREDLYYRLNGLEVALPALRERSDKAQLLDFLLAEEAAGQVVRLEAKARHALLD
FAWPGNVRQLRNVLRTLVALAEGEEITFNDLPPLIRRPPVAAIPTVSSEAPEHPLEDAER
SALLAVLEQQRWHMSHVAAHLGVSRNTLYRKLRKHGIARDA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgcagagcaatcatttgagccggcacgctcggcaagtgcttacggtgactcagggcaag
gcccacttgcaggggccgggcagcgatccatccatcgcccgttcctggctgcgttgtctg
gaggactatcatctcgatccggccatggcgatggcgccgaccgtgcttgagcatgggcgt
ctgctggaaagccgagagcgcctgcagcaggtgctgcagattgccggcaacgagatgaac
acgctgcatcaacagctttccggcgcaggccatgcggtgctgctgaccgatgcgcgtggg
gtaatcctcaactgtgtgacggcgccaaccgagcgcaaaatcttcgagcgtgccgggctc
tggctcggcgccgactggagcgaggccagtgaaggcaccaacgggattggtacctgcctg
gtcgagcgtcaagccgtcactattcatcaggaagagcattttcgtggccgtcataccggc
ctgacctgctctgccagcccggtgttcgacccccacggcgaactgcttgcggtgcttgac
gtatcgtcggcccgccctgaggtctcgcggcaaagtcagtttcacaccatggcgttggtc
aacctctcggcgaagatgatcgagagctgttacttcctgcgccatttcgaaaaccagtgg
ctactgcgctttcatttgcaggccgagtcggtgggcctgttcagcgaggggttgctggcg
tttgagggggatgggcgtatctgcgcggccaaccagagcgccctgaacttgcttgggcat
gttcgcggcggcctgcttggaaagcctgtggagatgttcttcgagtgttcactggatgag
ttgctggggcgtgctacggctcaggccaatgccagttggccgttgcgtacgcgtgatggt
cgccagttgtttgccagtgtgcgcggtcaggttcgggcgccacaaccgtcgtcattggcc
gcggtggcgttgccgccgccagcaccgattacgggttcgatttgcctggtcgaccctgca
ttgcagaacgattttcgtcgcgccgtgcgggtgttcgagcgcgatgtgccattgctgctc
aatggcgagaccgggtgtggcaaggaggcctttgccaaggccgtgcatcaggccagtcag
cgtgcggcaaagccgttcgtcgccctgaactgtgcctcgatccctgagagcctgatcgag
agtgagctgtttggctatcgcggcggctcgttcaccggtgcacgtaaggaggggatgcgt
gggaagctgcaacaggccgatggcggcaccctgttgctggatgaaatcggtgatatgccg
ctggcgctgcaaacccgcctgctgcgtgtgcttgaagagcgcagggtcgtgccgattggt
ggtgaaccccaggccgtggatgtccgcatcatcagcgccacccaccgcaacctgctggag
cgggtcgaggacggcagtttccgcgaagacctctactaccggctgaacggcctggaagtg
gccttgccggctctgcgtgaacgcagtgacaaggcccagttgctagattttctgctggcg
gaggaagctgcggggcaggttgtccgtctggaggcgaaggcgcgacatgccttgctcgat
ttcgcctggcccggcaacgtgcgccagttgcgcaacgtcctgcgcacattggttgcgctc
gcggagggcgaagagattaccttcaacgacctgccgccattgattcgtcggccgccagtt
gctgcgatacccacggtttccagcgaggcgcctgaacatccacttgaggatgctgaacgc
agcgctttgctggctgtgctggagcagcaacgctggcacatgagccatgtggcggcgcac
ttgggcgtgagtcgcaataccttgtaccgaaaactgcgcaagcatggtattgcccgggac
gcctga
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