Pseudomonas defluvii: QEP73_03185
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Entry
QEP73_03185 CDS
T10501
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu00260
Glycine, serine and threonine metabolism
pdeu00460
Cyanoamino acid metabolism
pdeu00630
Glyoxylate and dicarboxylate metabolism
pdeu00670
One carbon pool by folate
pdeu00680
Methane metabolism
pdeu01100
Metabolic pathways
pdeu01110
Biosynthesis of secondary metabolites
pdeu01120
Microbial metabolism in diverse environments
pdeu01200
Carbon metabolism
pdeu01230
Biosynthesis of amino acids
pdeu01240
Biosynthesis of cofactors
pdeu04981
Folate transport and metabolism
Module
pdeu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QEP73_03185 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QEP73_03185 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QEP73_03185 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QEP73_03185 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QEP73_03185 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QEP73_03185 (glyA)
Enzymes [BR:
pdeu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QEP73_03185 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
WJM97147
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Position
complement(682841..684094)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSQANAAVFLALLQAGDTVLGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGIDTATGLIDYDEVERLALEHKPKMIIAGFSAYSK
TLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEELEKKLNAAVFPGGQGGPLMHVIAAKAVCFKEALEPSFKAYQQQVIDNAQAMAG
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVSQCTALAGWICDILDNLGDADVEADVAKNVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttatgacgatgcactgctggcggcgatgaat
gccgaagagcagcgtcaggaagatcacatcgaactgatcgcctcggagaactacaccagc
aagcgcgtgatgcaggcccagggcagcggcctgaccaacaagtacgccgaaggctatccg
ggcaagcgttactacggcggttgtgagcacgtggacaaggtcgaacaactggcgattgac
cgtgccaagcaactgttcggtgccgactacgccaacgttcagccgcactccggcagccag
gccaacgcggcggtgttcctcgccctgctgcaggccggtgacacggtgttgggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtcagcttctccggcaagctctac
aacgcggtgcaatacggcattgacactgccaccggcctgatcgactacgacgaagtcgag
cgcctggcgttggagcacaagccgaaaatgatcatcgccggtttttcggcctactcgaaa
accctcgatttcccacgcttccgtcagatcgctgacaaagtgggcgcttacctgttcgtc
gacatggcgcacgtggctggtctggtcgcggccgggctgtacccgaacccgctgccgtac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggcccacgtggcggcctgatt
ctggccaaggccaacgaagaactggaaaagaaactcaacgcggcggtgttccccggcggc
cagggcgggcccctgatgcacgtcatcgcggccaaggccgtgtgcttcaaggaagccctg
gaacccagcttcaaggcgtatcagcagcaagtgatcgacaacgcccaggccatggctggc
gtgttcatcgaccgcggctacgatgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgatccgtcagggcctgaccggcaaagaggccgatgctgccctgggccgtgcc
catatcacggtgaacaagaacgccgtaccgaatgacccacagtcgccgttcgtcacgtcc
ggcctgcgcattggcaccccggcggtgaccacgcgcggcttcaaggtcagccagtgcacc
gcactggccggctggatctgcgacattctcgacaaccttggcgatgccgatgtcgaggcc
gatgtggcgaaaaacgtgtcggcactgtgtgcagactttccggtttaccgctga
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