Pseudomonas defluvii: QEP73_03840
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Entry
QEP73_03840 CDS
T10501
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu00260
Glycine, serine and threonine metabolism
pdeu00630
Glyoxylate and dicarboxylate metabolism
pdeu00670
One carbon pool by folate
pdeu00785
Lipoic acid metabolism
pdeu01100
Metabolic pathways
pdeu01110
Biosynthesis of secondary metabolites
pdeu01200
Carbon metabolism
Module
pdeu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QEP73_03840 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QEP73_03840 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
QEP73_03840 (gcvP)
00670 One carbon pool by folate
QEP73_03840 (gcvP)
Enzymes [BR:
pdeu01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
QEP73_03840 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
HrpE
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WJM97272
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Position
complement(833729..836602)
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AA seq
957 aa
AA seq
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MSQSPSLSQLYDANPFLRRHLGPDPGEQQAMLEALGLGSRVELIEQTVPPGIRLNRPLDL
PPALDEEAALAKLRGYAEQNQIWTSLIGMGYHGTLTPTVILRNVLENPGWYTAYTPYQPE
IAQGRLEALLNFQQMIIDLSGLDLANASLLDEATAAAEAMALARRVAKSKSNVFFADEHC
HPQTLSVLQTRADGFGFELVIDAVDNLAKYAVFGALLQYPDTHGEVRDLRPFIEQLHTQQ
ALACVAADLLSLVLLAPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDEFKRAMPGR
IIGVSKDARGNLALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRI
AQRVHRLTFILAAGLESKGIKRLNEHFFDTLTLEVGGSQTAIIQSAEAAQINLRILGRGQ
LGVSLDETCNEATVLRLFDIFLGADHGLDIATLDTHALPEGIPAALVRRSAYLTHPVFNL
HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNASSEMIPITWPGFAQLHPFAPAAQ
VQGYKAMIDELESWLCAITGFDAVCMQPNSGAQGEYAGLMAIAKYHRSRQQGQRDICLIP
ASAHGTNPASAQMAGMQVVIVDCDKDGNVDLTDLKAKAKAAGQRLSCLMATYPSTHGVYE
EGIVEICDVIHSHGGQVYMDGANLNAQVGLTRPADIGADVSHMNLHKTFCIPHGGGGPGM
GPIGVRAHLAPFVASHPVVPVPGPDPKNTAISAAPWGSASILPISWMYIAMMGPQLADAS
EVAILCANYLAQQLGGAFPVLYRGRNARVAHECILDLRPLKALTGITEEDVAKRLMDYGF
HAPTMSFPVPGTLMVEPTESESKAELDRFIEAMLSIRAEIAEVQNGNWPAEDNPLKGAPH
TLADVVGVWERPYSIAQAVTPSTHARLHKYWPAVNRVDNVYGDRNLFCACVPVEDYR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtcgccgtccctgagccaactgtacgacgctaatcctttcctgcgtcgccac
ctggggcctgaccccggcgagcagcaggccatgctcgaagcccttggcctgggcagtcgt
gtcgagcttatcgaacagaccgtcccacccggcattcgcctgaaccgccccctcgacttg
ccgcccgccctcgatgaagaggccgcgctggcgaagctgcgtggctacgccgagcaaaac
cagatctggaccagccttatcggcatgggctaccacggtaccctcacgccaacggtgatc
ctgcgtaacgtcctggaaaatcccggttggtacacggcctatacgccgtatcagcccgag
attgcccaagggcgactggaggctttgctgaactttcagcagatgatcattgacctcagt
gggctggacctggcgaacgcctcgctccttgatgaagccacggccgccgccgaagcgatg
gccttggctcgccgcgttgccaagtcgaagagcaacgtgttttttgccgatgagcactgc
catccacaaaccctctcggtattgcagacccgcgccgacggttttggttttgaactggtc
attgacgctgtggataacctcgccaaatacgctgtgttcggtgccttgttgcagtacccg
gacacccatggcgaggtgcgcgaccttaggccgtttatcgaacagctgcatacgcagcag
gcactggcgtgtgtcgccgccgacctgctgagcctggtgctgttggcgccaccgggcgag
ctgggggccgacgtggtgctgggttctacccagcgctttggtgtgccgatgggctatggc
gggccgcatgcggcttattttgcttgtcgtgacgagttcaagcgggcgatgccggggcgg
atcatcggtgtgtccaaggacgcccgtggcaacctcgcgctgcgcatggcactgcagacc
cgtgagcagcatattcgtcgggagaaggccaactcgaacatctgcacggcgcaagtgctg
ctggccaatatcgccggattctatgcggtctaccatgggccggaaggcctgaaacggatt
gctcagcgggtacaccgattgaccttcatcctggcggccgggctggagagcaagggtatc
aagcggctcaatgagcatttcttcgataccctgaccctggaagtgggcggcagccagact
gcgatcatccagagcgccgaggcggcgcagatcaacctgcggattctggggcgcggccaa
ctgggtgtcagcctcgatgaaacctgcaacgaagccacggtgctgcgcctgttcgatatc
tttctgggcgccgaccatggcctggacatcgcgaccctcgatactcatgccttgcccgag
gggatacccgcggcgttggtgcgccgctcggcctacctgacgcacccggtattcaatctg
caccacagcgaaaccgagatgctgcgctatctcaagcagttggagaacaaggatctggcg
ctgaaccagtcgatgattccactgggctcttgcaccatgaagctcaatgccagcagcgag
atgatccccattacctggccaggttttgcacagttgcatccgttcgcccccgccgcgcag
gtgcagggctacaaggccatgatcgacgaactggagagttggctctgcgcgatcaccggt
ttcgacgcggtctgcatgcagcccaactccggtgcccaaggtgaatatgccgggttgatg
gcgattgccaagtaccatcgcagccgccagcagggccagcgcgatatctgcctgatcccc
gcctcagctcatgggaccaacccggcgtctgcacaaatggccggtatgcaggtggtcatc
gttgactgtgacaaggacggcaacgtcgacctgaccgacctcaaggccaaagccaaggcg
gcaggtcagcgcctgtcctgcctgatggcgacctacccctcgacccacggtgtgtatgaa
gaggggattgtcgagatctgcgacgttatccacagccatggtggtcaggtttacatggac
ggggccaatctcaatgctcaggtcggcctgacccggccggccgatatcggtgccgatgtg
tcgcacatgaacctgcacaagaccttctgcattccccatggtggcggtggcccgggtatg
gggccgattggtgtccgggcccacttggcgccctttgtcgccagccacccggtggtaccg
gtgccagggcctgacccgaagaacacggcaatcagcgccgcgccctggggcagcgcgagt
atcctgccgatcagctggatgtacatcgcaatgatggggccgcaattggcggacgccagc
gaggttgcgatcttgtgtgccaactacctggcgcagcaattgggcggggcgtttccggtg
ctctatcgcggtcgcaatgcgcgggtggcgcatgagtgtattctcgatttgcggccgttg
aaggccctgaccggcattaccgaggaggatgtcgccaaacgcctgatggattacggtttc
catgccccgaccatgtcctttccggtgcccggcacgttgatggtcgagcctacggagagt
gagtcaaaggctgaactggaccggtttatcgaagcgatgctgagtatccgcgcagaaatt
gccgaagtgcagaacggtaactggccagcagaagacaacccacttaaaggcgcgccgcat
accctggcagacgttgtcggcgtatgggagcggccatacagcattgcgcaggctgtgacg
cccagcacgcatgcccggctgcacaagtactggcctgcggtgaaccgggtcgacaacgtg
tatggcgaccgcaacctgttctgcgcgtgtgtaccggtagaggactaccgctga
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