Pseudomonas defluvii: QEP73_04730
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Entry
QEP73_04730 CDS
T10501
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03420
Nucleotide excision repair
pdeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEP73_04730 (uvrD)
03430 Mismatch repair
QEP73_04730 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_04730 (uvrD)
Enzymes [BR:
pdeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEP73_04730 (uvrD)
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEP73_04730 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QEP73_04730 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJM97443
LinkDB
All DBs
Position
1029132..1031315
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSIL
SVTFTNKAAAEMRQRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLNQNFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLGTMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHLLVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYTSDFPDAELIRLEQNYRSTAGILKAANALIA
NNSGRLGKELWTDGGDGEPLSLYAAFNEHDEARYVVETIESVIKTGAARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRGI
GEKTVEAIREHARHAQVSMWEAVALLLANKGLKGRAASALSAFIELIENLAAKVLEMPLH
LMTQTVIEQSGLIVYHQEEKGEKGQARVENLEELVSAARNFETSEDDEDLSPLSAFLGHA
SLEAGEAQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVMTYAETRRLYGSETYNKVSRFVREIPAGLIQEVRLSNSVSRPFGSGQ
KQNSSSLFGSANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFAEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctcctgttgaactccctcaacgatgcccaacgtcaggccgta
gcggccccggttggccgtcagttggtcctggccggtgccggctccggcaaaacccgtgtg
ctggtgcaccgtatcgcctggttgatccaggtcgagcaggcctcaccgcattcgatcctg
tcggtgaccttcaccaacaaggctgccgccgagatgcgccagcgtatcgagcaactgatg
ggtatcaacccggcaggcatgtgggtgggcaccttccacggcctggcccatcgcctgttg
cgggcgcactggcaagaagccgggctgaaccagaatttccagattctcgacagcgacgat
cagcaacgcctggtcaagcgcgtaatccgcgagttgggcctggacgaacagcgctggcct
gcacgccaggcgcaatggttcatcaatggccagaaagacgaaggcctgcgcccacagcat
attcaagccagcggcgacctgttcctgggcaccatgcgcagcatttatgaagcctatgag
gccgcctgccagcgcgctggcgtcatcgacttctccgaactgctgctgcgcgccctggac
ctctggcgcgaccatcccggcctgctggagcattaccagcgccgcttccgccacttgctg
gtggatgaattccaggacaccaacgccgtgcaatatgcctggctgcggctactggccaag
ggtggcgacagcttgatggtggtcggcgacgacgatcagtccatttatggctggcgcggt
gccaagatcgagaacattcaccagtacaccagcgacttccccgacgccgagttgatccgc
ctggagcagaactaccgctccaccgctggcatcctcaaagccgccaacgccctgatcgcc
aacaacagcgggcgcctgggcaaagagctgtggaccgacggtggcgacggcgaaccactg
agcctttacgccgccttcaacgaacacgacgaagcgcgctacgtggtggaaaccatcgaa
agcgtgatcaagaccggtgcggcgcgtagcgatatcgccatcctttaccgctccaacgcc
cagtcgcgggtgctcgaagaggccctgctgcgcgaacgcatcccctatcgaatctacggg
gggcaacgcttcttcgagcgcgccgagatcaagaacgccatggcctatttgcgcctgctg
gagggccgtggcaacgacgcggcactggagcgggtcattaatgtgccgccgcgtggcatc
ggtgagaaaaccgtcgaagccattcgcgagcatgcccgccatgcccaagtctcgatgtgg
gaggccgtggccctgctgctcgccaacaagggcctcaagggccgtgcagccagcgcgctg
agcgcctttatcgaactgatcgaaaacctggcggcgaaggtgctggaaatgccgctgcac
ctgatgacccagacagtgatcgagcaatcagggctgatcgtctatcaccaggaagagaaa
ggtgagaaaggccaggcacgggtagaaaaccttgaggaactggtcagcgcagcgcgcaac
tttgaaaccagtgaagacgacgaagacctctcgccgctctcggcattcctcggccatgcc
tcgctggaagccggtgaggcccaggccgatgagcatgaagacagcatccagttgatgacc
ctgcacagcgccaagggcctggagttcccttacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaggagccggggcgcctcgaagaggaacgccgcctg
gcctatgtcggcattacccgggccatgcagcaactggtcatgacctacgccgaaacccgc
cgcctgtacggcagcgagacctacaacaaggtgtcacgtttcgtacgtgaaattccggcc
gggctgattcaggaagtgcgtttgtccaacagcgtcagccgcccgttcggttctggccag
aagcagaattcgagcagcctgttcggtagcgctaacatcccgcaaaccgccttcaacctc
ggccagcgggtacagcatgcagtgtttggcgaaggcgtgatcctgaactttgaaggctcc
ggcgcgcaggcacgcgtgcaagtcaacttcgccgaaggcagcaagtggctgatgctgggt
tatgccaagctggaagccatctaa
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