Pseudomonas defluvii: QEP73_05765
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Entry
QEP73_05765 CDS
T10501
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03030
DNA replication
pdeu03410
Base excision repair
pdeu03420
Nucleotide excision repair
pdeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QEP73_05765 (polA)
03410 Base excision repair
QEP73_05765 (polA)
03420 Nucleotide excision repair
QEP73_05765 (polA)
03440 Homologous recombination
QEP73_05765 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdeu03032
]
QEP73_05765 (polA)
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_05765 (polA)
Enzymes [BR:
pdeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QEP73_05765 (polA)
DNA replication proteins [BR:
pdeu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QEP73_05765 (polA)
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QEP73_05765 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEP73_05765 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
WJM97637
LinkDB
All DBs
Position
1238066..1240828
Genome browser
AA seq
920 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPGSLFAVVFD
AKGGTFRDEMFAEYKANRPSMPDDLRVQIEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSAAAGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTALGLLTGVGGGLRDLYDNLDKVPSLAIRGAKTLPAKLEEHRDA
AFLSYELATIKLDVPLDIEVDALVCGEPDREALLALYTELEFKSWVEEIQREAKREGVAV
AEVAEQPSVEVKYEAILDQARFDVWLEKLKKATLIAFDTETTGLDAQQAQIVGVSFAVEP
FEAAYVPLTHSYMGVPEQLDRDAVLLALKPILEDPNTLKVGQNAKYDMNILANCAIGGDQ
ANGIALRGVAFDTMLESYVLDSTATRHDMDSLALKYLDYTTISFEDIAGKGAKQLTFDQI
SLETAGPYAAEDADVTLRLHQALQARLAKTPSVLPVLNEIEMPLVPVLAKIERQGALVDA
KLLGAQSLELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPILSKTAKGQAST
AEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGR
LSSSDPNLQNIPIRTPEGRRIRQAFVAAPGYRLLAADYSQIELRIMAHLAKDEGLLHAFR
HNLDVHRATASEVFGVALEEVTSDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAYI
DRYFAQYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPM
QGTAADIIKRAMVAVDNWLNDSGLDARVILQVHDELVLEVREDLVDQVREQIRPYMSSAA
QLDVPLLVEVGVGSNWDEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgtcctggtggacggttcttcctacctgtaccgcgccttccat
gcgctgccgccactgaccacctccaagggcctgccaaccggtgcggtcaagggcgtgctg
aacatgctgaagagcctgcgcaagcagtatcccggcagcctgtttgcagttgttttcgat
gcaaaaggcggcacgttccgcgacgaaatgttcgccgagtacaaggccaatcggcccagt
atgccggatgacttgcgggtgcagatcgaaccgctgcatgccagcgtgcgtgcactgggg
tatccgctgctttgtgtggagggcgtcgaagccgatgacgtgattggcaccctggcccgc
agcagcgcggctgccggacgtccggtgatcatctccacaggcgacaaggacatggcgcaa
ctggtcgatggccacattacgctggtcaacaccatgaccggtagtgtgctggacgtggct
ggcgtgaaggagaaattcggcgtcggtcccgaacacatcatcgacttcctggctcttatg
ggtgacaaggtcgataacattcctggcgtgccaggggtgggcgagaaaaccgcgttgggc
ctgctgactggtgttggtggcggtctgcgcgatctctacgacaacctcgacaaggtaccc
agcctggctatccggggggccaagaccctgccggccaagcttgaggagcaccgcgacgcc
gcgttcctctcgtatgaactggcgacgatcaagctcgacgtcccgctggatatcgaggtt
gacgcactggtgtgcggtgaacccgaccgcgaagccttgctggcgctgtacaccgagctg
gagttcaagagctgggtcgaggagattcagcgtgaggccaagcgtgaaggcgtggcggtt
gccgaggtggcagagcagccatcggtcgaagtgaagtatgaagccatccttgaccaggcg
cgctttgacgtctggctggaaaaactgaagaaggccacgctgattgctttcgacaccgag
accacgggtcttgatgctcagcaggcgcaaattgtcggtgtgtcgtttgctgtggagccc
tttgaggcggcctatgtgccgttgactcactcctacatgggcgtgcccgagcaacttgat
cgagacgccgtgttgttggcgcttaagccgatcctggaagacccgaatacgctgaaagtc
ggccaaaacgccaaatatgacatgaatattctggcaaattgcgcgattggcggtgatcag
gcaaacggtatcgcgctgcgtggtgtggccttcgacaccatgctggagtcctacgtgctg
gattccaccgcgacccgtcatgacatggacagcctggcgctcaagtacctggactacacc
actatttcctttgaggacatcgccgggaaaggcgccaagcaactgaccttcgaccagatt
tcgcttgaaacggccggcccctacgcggccgaagatgccgatgtgacgttgcgtctgcat
caggcattgcaggcacgcttggccaagacaccgagcgtgctgccggtgttgaacgagatc
gagatgccgctggtgccggtgctggcgaagatcgagcgtcagggtgcactggtcgatgcc
aagctgctcggtgcccagagcctggagctgggtgagaaactggtcgcgctggagcgtgaa
gccttcgcgatcgcgggtgaagagttcaacctgggctcgcctaagcagttgggggtgatt
ctgtacgaaaagctcggcctgccgatcctcagcaagaccgccaagggccaggcttccacg
gctgaggctgtgctggcggaactggccgaacaggactacccactgcccaaggtgctgatg
cagtaccgctcgctgagcaagctgaaaagcacctacaccgaccgtctgcccgagcagatc
aacccgcgcactgggcgtatccatacctcgtatcatcaggccgtggcggccaccggtcgt
ttgtcctcaagtgatccgaacctgcagaacatcccgattcgcacccctgaggggcggcgt
attcgccaggcgtttgttgccgcgcccggctaccgtctgctggctgcggactattcgcag
atcgagttgcgcatcatggctcacctggccaaggacgaagggctgttgcatgcgttccgg
cacaacctggacgttcaccgggccacagcctccgaggtcttcggcgttgccttggaagag
gttacaagcgaccagcggcgcagtgccaaggcgatcaacttcggcttgatctacggtatg
agcgctttcggtctggccaagcagattggtgtcgatcgcaagcagtcccaggcctacatc
gaccgttatttcgcccagtacccaggcgtgctggcgtacatggagcgcacgcgtgctcag
gctgccgagcaagggtttgtcgaaaccctgttcggtcgccgcctgtacctgccggacatc
aatgcaaagaacccggcactgcgcaaaggcgcggagcgcacggcgatcaacgcaccaatg
cagggtactgcagccgacatcatcaagcgggccatggtggcggtagacaactggctgaac
gattccggactggatgctcgggtgatcctgcaggttcacgatgaattggtgctggaagta
cgtgaagacctggtcgatcaggtgcgtgaacagatccgtccgtacatgagcagcgccgcg
cagttggatgttccgctgctggtggaggtaggtgtgggctcgaattgggatgaagcgcac
taa
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