Pseudomonas defluvii: QEP73_06210
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Entry
QEP73_06210 CDS
T10501
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu00300
Lysine biosynthesis
pdeu00470
D-Amino acid metabolism
pdeu01100
Metabolic pathways
pdeu01110
Biosynthesis of secondary metabolites
pdeu01120
Microbial metabolism in diverse environments
pdeu01230
Biosynthesis of amino acids
Module
pdeu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QEP73_06210 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QEP73_06210 (dapF)
Enzymes [BR:
pdeu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QEP73_06210 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
SPO11_like
Tail_completion_gp17
Motif
Other DBs
NCBI-ProteinID:
WJM97719
LinkDB
All DBs
Position
complement(1348298..1349128)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETRSGVIELNVRSDGQICVDM
GPPRLVPADIPFQAPEQALSYSVDVDGQQVEMAAVSMGNPHAVLRVDDINQAPVHTLGPK
IEHHPRFPQRVNVGFIQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHPVMMTGPAVRVFEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaaaatgcatggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcatgcacacattctgcccaagcacgccaagcaatggggcgaccggcatacc
ggtatcggcttcgatcagttactgatcgtcgaagcaccgagcaatccggacgtggacttt
cgctaccggatcttcaacgccgacggctccgaagtggaacagtgcggtaacggtgcacgt
tgcttcgcccgcttcgtgctggacaaacgcctgaccgccaagaaacagatccgcgtcgaa
acccgtagcggcgtcattgagctcaatgtccgtagcgatgggcagatctgtgtcgacatg
ggcccaccacggctggtcccggccgatattccgttccaggcccccgaacaagccctgagc
tattcggtggatgtggacggccagcaggtcgaaatggccgccgtctccatgggcaacccg
cacgccgtgctgcgtgtcgatgacatcaaccaggcaccggtacataccctggggccgaag
atcgaacaccacccacgcttcccgcaacgtgtgaatgtcggctttatccaggtcattgat
cggcaccgcgcacaactgcgggtctgggaacgtggcgccggggaaacccaggcctgcggt
accggcgcctgcgctgctgcagtggccgcgatcagccaaggctggatggattcacccctg
cttatcgacctgccaggcgggcgcctgtcgattgaatgggcaggacctggccacccggtg
atgatgaccgggccggccgtgcgcgttttcgaaggacaggttcgtctatga
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