Pseudomonas defluvii: QEP73_06535
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Entry
QEP73_06535 CDS
T10501
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu00300
Lysine biosynthesis
pdeu00470
D-Amino acid metabolism
pdeu01100
Metabolic pathways
pdeu01110
Biosynthesis of secondary metabolites
pdeu01120
Microbial metabolism in diverse environments
pdeu01230
Biosynthesis of amino acids
Module
pdeu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QEP73_06535 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QEP73_06535 (lysA)
Enzymes [BR:
pdeu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QEP73_06535 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WJM98840
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Position
complement(1412501..1413739)
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AA seq
412 aa
AA seq
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MTDSMLTRLAAEHGTPLWVYDAQVIRQRIQQLAGFDTIRFAQKACSNLHVLRLMREAGVA
VDAVSLGEIERALKAGFKTGRTSGAAEVVFTADLFDRATLNRVVETQIEVNVGSIDMLEQ
LGERSPGHRVWLRINPGFGHGHSNKTNTGGENSKHGIWHEQLQEALAQVRKYQLHLVGLH
FHIGSGVDYSHLQRVCSAMVELIGRLDHDIEAISTGGGLSVPYRDGEQAVDIAHYLTQWR
EAKQQIEQKLGHPVRLEIEPGRFLVAESGLLVAEVRGTKPMGSNHFTLVDAGFNDLMRPS
MYGSYHEISLIPQPGTAQAPRPPRATVVAGPLCESGDVFTQLEGGIVESRLLPSAQVGDY
LVFHTAGAYGASMSSNYNSRGHAAEVLIDGEASRLIRKRQSLESLLALELDA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atcaccgatagcatgctgacccggttggccgccgaacacggcaccccactgtgggtgtac
gacgcccaggtaattcgtcagcgcatccagcaactggcgggcttcgacaccatccgcttc
gcccagaaagcctgctcgaacctgcatgtattgcgcctgatgcgtgaagcgggggtagcg
gttgatgccgtgtcactcggtgaaatcgagcgcgcactcaaggccggcttcaaaaccggc
cgcacctcaggtgctgccgaagtggtgttcaccgccgacctgttcgaccgggccaccctg
aaccgcgtggtagaaacgcagatcgaggtcaacgtgggctcgatcgacatgcttgagcaa
ctgggcgagcgctcccctgggcaccgggtctggctgcgcatcaacccgggcttcggtcac
ggccatagcaacaagaccaacaccggcggtgaaaacagcaagcacggaatctggcacgag
cagctacaagaggcgctggcccaggttcgcaaatatcagctgcatctggtcggcctgcat
ttccatatcggctcgggcgtggactactcccacctgcagcgagtatgcagcgccatggtg
gaactgattggccgcctggaccacgacatcgaagcgatctctaccggtggcgggctgtca
gtgccttaccgcgatggcgagcaggccgtagacatcgcgcactacctcacgcagtggcgt
gaagccaaacagcagatcgagcagaagttgggtcacccagtgcgcctggaaatcgagccg
ggccgtttcctggtggccgagtccggcctgctggtcgctgaagtacgcgggaccaagccg
atgggcagcaaccacttcaccttggtcgatgccggtttcaatgacctgatgcgcccctcg
atgtacggcagctaccacgagatttcactgattccacagcctggcaccgcgcaggcgccg
cgtccgccgcgcgctaccgtggtggcaggcccgttgtgcgaatccggtgatgtgtttact
cagcttgaaggcggcattgtcgaatcgcgcctgctgccgtcggctcaggtgggggattac
ctggtgttccataccgccggcgcctatggcgcgtcgatgtcgtcgaactacaacagccgc
gggcatgccgctgaagtactgatcgacggcgaggccagtcggttgatccgcaaacgccaa
agccttgagtcgttgctggcgcttgaactggacgcctga
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