Pseudomonas defluvii: QEP73_06810
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Entry
QEP73_06810 CDS
T10501
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QEP73_06810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_06810
Enzymes [BR:
pdeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEP73_06810
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QEP73_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
AAA_16
TrwB_AAD_bind
iSirtuin
HypA
nSTAND3
AAA_22
PIF1
Motif
Other DBs
NCBI-ProteinID:
WJM97832
LinkDB
All DBs
Position
complement(1469889..1472108)
Genome browser
AA seq
739 aa
AA seq
DB search
MSDVILRLALPSPLRRLFDYRAPASMARVELTPGMRIRVPFGRREMIGILVEVCDHSDVP
ADKLKPAIALLDPVSPLPPAFFKLCLWTAQYYQHSLGDTFSWALPVFLRQGEPAEARQER
FWQIAPGARLDDPRIARAPRQREALSTLAQHPHGVAHGLLGKLGLNKDSLDLLLSKELVQ
VEVRRHAPQQRHEHWLAQPELPLNEEQHAAFNAVRAGFDSFHAFLLAGVTGSGKTEVYLQ
LIREALEAGKQALILIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNHRAGGAQAPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECPRCDARMTVHQRSGELRCHHCGYDERVPRQC
PQCNKVDLRPVGAGTERAEERLSILFPDYPVLRVDRDSTSRKDAMNQLFATIQRGQPCIL
VGTQMLAKGHHFPRVTLVAILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGRVII
QTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CAAAEQLLAEHNLHGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHRLINAWLLLLEH
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgtcattctgcgccttgctctgccctcgcccctgcggcgactgttcgactac
agggccccagcgagcatggcccgcgtcgaactgacacccggcatgcgcattcgtgtgcca
ttcggtcggcgcgagatgatcggcatcctggtggaggtctgcgaccacagtgacgtccca
gccgacaagctcaagcccgccatcgcgctgctcgatccggtctctccactgccgccagcc
ttcttcaagctgtgcctgtggaccgcgcagtactaccagcacagcctgggcgacaccttc
agctgggcgctgccggtgtttctgcgccagggtgaaccggccgaagcgcggcaggagcgc
ttctggcagattgcacctggcgcacgcctggacgacccgcgcattgcccgggcaccacgc
caacgtgaagcattgtcgaccctggcccagcacccgcacggcgtcgcccacggcctgctc
ggcaaactgggcctgaacaaagacagccttgacctgctgctgagcaaagaactggtgcag
gttgaagtacgccgccatgcgccgcaacagcgccatgagcattggctggcacaaccggaa
ctgccgctcaacgaggaacagcacgccgccttcaacgccgtgcgagccggcttcgacagc
ttccacgccttcctccttgctggtgtcaccggcagcggcaagaccgaggtttacctgcaa
ctgatccgtgaagccctggaagctggcaaacaggcgctgattctgatccccgagatcaac
cttggcccacagaccctggcccgcttcgagcaacgcttcaatgcccgcatcgccttattg
cactccgcggtcaacgatcgcgaacgcctggatgcctggctggcggcccgcgatggcgag
gccgacatcatcatcggcacccgttcagccctgttcacccccatgaagaacccggggctg
atcatcattgatgaagagcacgacggctcctataaacagcaagaaggcctgcgttaccac
gcacgcgacctggcactggtgcgcgctcgccaggaaaacatcccgatcgtgctgggctcc
gccacgccatcgctggaaagcctgcacaatgcctacacgggtcgctacggcctgctgcgc
ctgaaccaccgcgccggaggtgcccaggcaccgcgttttctgcgtctggacgtcaagagt
cgcccactggacagcggcatcagcggcccgatgcaacaagccatcggccagacactcgca
gcggggcagcaggtattggtgttcctcaaccgccgaggctttgccccgacattgctctgc
catgattgcggctggatgtccgagtgcccgcgctgcgatgcgcggatgaccgttcaccag
cgctccggcgagttgcgctgccaccattgcggctatgacgagcgcgtgcctcgccagtgc
ccacaatgcaacaaggtcgacctgcgcccggtcggcgccggcaccgagcgcgccgaagaa
cgcctgagcatcctgtttccggactacccagtgctacgcgtcgaccgcgacagcacctcg
cgcaaggatgcgatgaaccagttgtttgccaccatccagcgcggtcagccgtgcattctg
gtcggcacccagatgctggccaagggtcaccacttcccgagggtcacgctggttgccatt
ctcgatgccgatggtggactgttttccggcgatttccgcgccagcgagcgcatggcccag
ttgatcgttcaagttgcgggccgcgcagggcgcgcagaagagcccggcagggtcattatc
cagactcacctggccgaccatccactgctggtgcaactgaccgaacaaggctacttcgcc
tttgccgagcaggccctgagcgagcgtcgtgcagcaggcctgccgcccttcgcacacctt
gccctcctgcgcgccgaagcccacaagccggggcaggccgaaggctttctcgatgaagcc
tgcgccgccgccgaacaactgctggccgagcacaacctgcatggcatcgaactgctcggg
ccagtacctgcgccaatggagcgtcgggccggtcgttaccgcgcacagttgctgctgcag
gccaacgcacgcgcgccgctgcatcggctgatcaatgcctggctgctattgttggaacac
atgcccagcgggcggcaggtacgctggtcgctggatgtggacccggtcgacctctactga
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