Pseudomonas defluvii: QEP73_07700
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Entry
QEP73_07700 CDS
T10501
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QEP73_07700 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdeu03019
]
QEP73_07700 (orn)
03009 Ribosome biogenesis [BR:
pdeu03009
]
QEP73_07700 (orn)
Messenger RNA biogenesis [BR:
pdeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QEP73_07700 (orn)
Ribosome biogenesis [BR:
pdeu03009
]
Eukaryotic type
Pre-60S particles
RNases
QEP73_07700 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WJM98000
LinkDB
All DBs
Position
1688297..1688839
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDHDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKIDMAAAEAQTLAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
ELENYFHYRNLDVSTLKELAARWAPEVRDSFKKGGTHLALDDIRESIAELRHYREHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccccagaacctgatctggatcgatctggaaatgaccggtctggaccctgat
catgatgtcatcatcgagatggccacgattgtcaccgacagtgacctgaataccctggct
gaagggccggtcatcgcgatccatcacagcgatgaggtgctggcgcgcatggacgagtgg
aacacccgtacccacggcgcttcgggcctgacccagcgtgtacgggagagcaagatcgac
atggccgccgccgaagcacagaccctggccttcctcgagcagtgggtgccgaagggcaag
tcgccgatctgtggcaacagcatctgtcaggaccgccgcttcctctaccgccacatgcgt
gagctggaaaactatttccactaccgtaatctcgacgtctcaacgctcaaggagctggcc
gcacgctgggcgcctgaggtccgcgacagtttcaagaaaggtggaacccatctggcgctg
gacgacatccgcgaatccattgccgagctgcgtcactaccgcgagcacttcatcaagttc
tga
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