Pseudomonas defluvii: QEP73_10310
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Entry
QEP73_10310 CDS
T10501
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03410
Base excision repair
pdeu03430
Mismatch repair
pdeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QEP73_10310 (recJ)
03430 Mismatch repair
QEP73_10310 (recJ)
03440 Homologous recombination
QEP73_10310 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_10310 (recJ)
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QEP73_10310 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QEP73_10310 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QEP73_10310 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WJM98494
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All DBs
Position
2262833..2264542
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AA seq
569 aa
AA seq
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MRIEPRPLPTTLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLLPYQQMKGIDAAVDLL
VEALEQRQRILIVGDFDADGATASTVGMLGLRLLGAAHVDYLVPNRFEFGYGLTPEIVAV
ALERQPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGNELPAADAIVNPNQPGCTF
PSKALAGVGVIFYVLMALRARLRSLGHYANRPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLSEDAGQAQEMATQLDELNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFEPDWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGG
HAMAAGLSLPAEHFPAFAQAFDEEVRRQLREDDLTGRLLSDGSLSAEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGIDRDIWPNPTVR
WVELAYKLDLNEFRGQETVQLMIVHMEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccgcggcccttgccgaccacgttgcctttccttggcgatctgccaccc
ctgttgacccgtttgtacgctgcgcgtggcgtgcagtccgaggccgagctggataaaagc
ctggcgcgcctgttgccgtaccagcagatgaagggcattgatgcggcggtcgacctgctg
gtcgaggccctggagcagcgccagcgtattctgattgtcggtgacttcgatgccgacggc
gcgaccgccagtacggtgggcatgctcggtttgcgtttgctgggggctgcccacgtcgat
tacctggtgcccaaccgtttcgagttcggttacggcctgactccggaaatcgttgcagta
gccctggagcgtcagcctcagttgctgattaccgtggacaacggcatctccagtgtcgag
ggcgtggcggcagccaaggccgccgggctcaaggtattggtgaccgatcaccatttgccc
ggcaacgaactgccggcagcggatgccatcgtcaacccgaaccagccgggctgcaccttc
ccgagcaaggcattggccggggtaggggtgatcttctatgtgctgatggcgctgcgggcg
cggctgcgcagcctcgggcattacgccaaccggccgcagccgaacatcggcgaactgctt
gatctggtggccctgggcagcgtcgccgacgttgtgccactggatgcgaacaaccgtatt
ctggtgcatcagggcctggagcgcatccgcgccgggcgggcccggcctgggctcaaggcc
attctggaagtggcccgacgtgaccatcggcgtattacctcgactgaccttgggttcatt
cttggaccacggctcaatgcggccgggcgtctggatgacatgagcctgggcattgaatgc
ctgctcagcgaggatgcgggccaagcgcaggaaatggcgacccaactcgacgagttgaac
caggaccgcaaatccatcgagcagggcatgcagcgtgaggcgctggcccagctcaaggac
ttgccactggagtcgatgccgttcggcctgtgcctgttcgagcccgactggcaccaaggc
gtcatcggtattctcgcctcgcgactgaaggagcgttaccaccgcccgaccatcgccttt
gccgatgccggtgagggcatgctcaagggctcggcccgctcggtgccggggttccatatc
cgcgatgcactggacgcggtagctgctcgtcatccacagttgatcagcaagttcggtggc
cacgcgatggcggccggtctgtcattaccggcagaacactttccggcgttcgctcaggcc
tttgatgaggaagtgcgtcggcaattgcgtgaagacgacctgaccggtcggttgttgtcc
gacggcagcctttcggcggaggagtttcacctggagctggcgcgggcgttgcgtcatgcc
ggcccatgggggcaacacttccctgaaccgctgtttcacggggtgtttcaactggtcgag
cagcgggtggtgggggagcgccacctgaaagtggtgctcaagagtgagtgtggctcggtc
aagctcgacggtattgcctttggcattgatcgggatatctggcccaaccctaccgtgcgt
tgggtggagctggcctacaaactcgaccttaacgagttccgagggcaggaaaccgtgcaa
ttgatgatcgtccatatggagccgcgctga
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