Pseudomonas defluvii: QEP73_10645
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Entry
QEP73_10645 CDS
T10501
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03030
DNA replication
pdeu03430
Mismatch repair
pdeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QEP73_10645 (dnaE)
03430 Mismatch repair
QEP73_10645 (dnaE)
03440 Homologous recombination
QEP73_10645 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdeu03032
]
QEP73_10645 (dnaE)
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_10645 (dnaE)
Enzymes [BR:
pdeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QEP73_10645 (dnaE)
DNA replication proteins [BR:
pdeu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QEP73_10645 (dnaE)
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QEP73_10645 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
WJM98560
LinkDB
All DBs
Position
2337980..2341501
Genome browser
AA seq
1173 aa
AA seq
DB search
MSASFVHLRLHTEYSLVDGLVRIKPLVKALAGMNMPAVAVTDQSNMCSLVKFYKAAMGAG
VKPICGADLWLASADPDAPLARICFLAMDAQGYRNLTELISRGWMDGQRNGLVIIERDWI
AQASEGLIALSAAREGDIGMALLAGNPDEAERLLRDWMAMFPERFYVEVQRTNRTGDEEY
LHAAVALADKLGAPLVATNDVRFIKQSDFDAHETRVCIGEGRALDDPRRSRNYSDQQYLK
SPAEMAELFSDLPEALENTVEIAKRCNIQVQLGKYFLPDFPTPNGMSIDDYLRHVSHEGL
EERLAVLWPKETTPDYEAKRQTYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYV
AEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EMLRDFLKSDEEAQEIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMETINREQAKNGLDDLNIDFIPLDDRKTFE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNNIDAELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRSMKLRLDAPDVNTSDFKFTVNDDGRIVYGLGAI
KGVGEGPVEAIVEARADGPFKDLFDFCERVDLKRINKRTLDALVRSGALDRLGPYFHDEL
KAYQANIDRNRAVLLAAMEEAIKSAEQTARTHDSGHADLFGGLFVEEDADVYANHRKARE
LTLKERLRGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQAVAGMIIALRVM
KNKKGDKMGFVTLDDRSGRIEASLFADAFHSAQALLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKVRSDALKGDRLTWLGELFKRHRGACPITLEYTGTDAKAL
LQFGEGWRIDPADGLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcttctttcgttcatcttcgcctgcacaccgaatactcgctggtcgatggcctg
gtgcgcatcaagccgctggtcaaggcgttggccgggatgaacatgccggccgttgcggtc
actgatcagagcaacatgtgttcgctggtcaagttctacaaggcagccatgggcgcgggc
gtcaagccgatctgtggtgccgacctgtggctggcaagcgcggacccggatgcgcctctg
gcacgcatctgctttctggcgatggatgcccagggttatcgcaacctcaccgagttgatt
tcccgcggttggatggacgggcagcgcaatggtctggttatcatcgagcgtgactggatt
gcccaggccagcgaaggtctgattgccctctctgcggcccgcgaaggcgatatcggcatg
gcattgctcgcgggtaatcccgacgaggcagaacgcctgctgcgtgactggatggcaatg
ttcccggagcgcttctatgtggaagtgcaacgcaccaaccgcacgggtgacgaagaatac
ctgcacgctgcggtggccctggctgacaagcttggcgcgccgctggtggcgaccaacgat
gtacggttcatcaaacagtcggacttcgatgcgcatgaaacgcgcgtctgcatcggcgaa
ggtcgggcgctggatgacccgcgccgctcgcgtaactacagcgatcagcaatacctgaaa
agcccggcggaaatggctgagctgttcagtgatctgccagaggcgctggaaaacacggtt
gaaattgccaagcgctgcaatatccaggtgcagttgggtaaatacttcctgccggacttc
ccgacgcccaatggcatgtccatcgacgactacctgcgtcatgtatcacatgagggcctg
gaggaacgtctggcggtgttgtggcccaaagagaccacgcccgactatgaggcgaagcgc
cagacctacctggaccggctgaagttcgaactcgacatcatcatccagatggggttcccg
ggttacttcctgatcgttatggacttcatcaagtgggccaagaacaacggcgtgccggta
ggccctggtcgtgggtcgggtgcgggctcactggtggcttacgttctgaagatcaccgac
ctcgatccgctggcttacgacttgctgtttgagcggttcctcaaccctgaacggatctcc
atgcccgacttcgacgtcgacttctgcatggacggtcgtgaccgggtgattgactatgtg
gccgaagcctatgggcgcaatgcggtaagccagatcattacctttggcaccatggcggca
aaggcggtagtgcgagatgtggcgagggtgcagggcaagtcttacgggcttgccgaccgg
ttgtcgaagatgatcccgttcgaagtcggcatgaccctggaaaaggcctacgagcaggag
gagatgctgcgcgacttcctcaagagcgatgaggaagcccaggagatctgggacatggcc
ctgaagcttgaaggggttactcgcggcacgggcaagcacgccggtggtgtggtgatcgcc
ccgaccaagctgaccgacttctcgccgattgcctgtgacgaagagggcggcggcctggta
acccagttcgacaaggacgatgtcgaggcggcgggcctggtgaagttcgacttcctcggc
ttgcgtaccctgaccatcatcaaatgggcgatggagacgatcaaccgtgagcaggccaag
aacggcctggacgacctgaacatcgacttcatcccgcttgacgacagaaagaccttcgaa
ctgctgcaaaaagccgaaacgacggcagtgttccagcttgaatcgcggggtatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacctcattgcactggttgcgctgttc
cgtcccggcccgctgcagtcgggcatggtggacgacttcatcaaccgtaagcacggccgc
gccgagctggcctatccgcacccggactaccagtacgaaggcctgaagccggtgctggcg
cctacctacggcatcatcctgtatcaggaacaggtgatgcagatcgctcaggtcatggcg
ggttacactctgggtggcgccgacatgctccgtcgggccatgggcaagaaaaagcccgag
gagatggccaagcagcgcggcggtttcatcgaagggtgtgcgaacaacaatattgatgct
gagcttgccggtaacatctttgacctggtagagaagtttgccggttacggcttcaacaag
tctcactcggcggcctatggcctggtgtcgtaccagaccgcctggctcaagacccactac
ccggcaccgttcatggcggcggtgctctcggcggatatgcacaacaccgacaaggtggtc
acgctgatcgaggaagtgcgcagcatgaagctgcgtctggacgccccggacgttaacact
tcggacttcaagttcacggtcaacgacgacggtcggattgtctacggcctgggcgcgatc
aagggtgttggtgaagggccggtagaagccattgtcgaggctcgcgccgacggtccgttc
aaggatctgttcgatttctgcgagcgcgtggacctcaagcgcatcaacaagcgcaccctc
gatgcactggttcgtagcggcgcgctggatcgcctggggccttattttcatgacgagctc
aaggcctaccaggccaacatcgaccgcaaccgtgcggtactgctggcggccatggaggag
gcaatcaagtcggcggagcagactgcgcgtacccatgacagcggccacgccgatctgttt
ggggggctgttcgtcgaggaagacgccgacgtttatgccaatcaccgcaaggcccgagaa
ctcaccctcaaggagcgcctgcggggcgagaaagatacccttggcctctatctgaccggg
cacccgatcgatgagtatgaaggtgagattcgtcgtttcgcgcgccagcggatcattgat
ctgaagccagcccgtgacacccaggccgtcgcgggtatgatcatcgccctgcgggtgatg
aagaacaagaaaggcgacaagatgggctttgtgacccttgacgaccgttccggacggatc
gaggcgtccttgttcgccgatgcattccattctgctcaggcattgttgcagaccgacgca
atggtcgtggttgaaggggaggtcagtaacgatgacttctccggcggcttgcgcctgcgg
gtcaagcgcgtcatgagcatggaagatgcgcgtaccaacctggccgaaagcctgcgcctg
aaggtgcgtagtgatgcgctcaaaggtgatcgcttgacctggttgggggagttgttcaag
cgtcatcgtggcgcctgcccgatcacattggagtacaccgggaccgatgccaaggccttg
ctgcagttcggcgagggctggcgtatcgatccggccgatggcttgatccaggcactgcgt
gaccagttcggacgtgagaacgtctttttgcaatatcgatga
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integrated database retrieval system
