Pseudomonas defluvii: QEP73_11295
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Entry
QEP73_11295 CDS
T10501
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu02025
Biofilm formation - Pseudomonas aeruginosa
pdeu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QEP73_11295 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QEP73_11295 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdeu02044
]
QEP73_11295 (tssH)
Secretion system [BR:
pdeu02044
]
Type VI secretion system
Imp/Vas secretion system core components
QEP73_11295 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_16
AAA_22
AAA_7
nSTAND3
Sigma54_activat
Clp_N
NACHT
AAA_29
IstB_IS21
DUF6374
ResIII
AAA_30
AAA_24
NBD_SMAX1
T2SSE
Hpr_kinase_C
DUF5947
SLFN-g3_helicase
UQCC2_CBP6
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WJM98682
LinkDB
All DBs
Position
2468935..2471544
Genome browser
AA seq
869 aa
AA seq
DB search
MINVDLQQLIQALDTETRRDLERAAESCVSRGGSKVLVEDLLLGLLERPHGLLARALRDA
EVEAGELSAVLQVQAEHSASRNPVFAPELVQWLQDALLVANLDLGQSQVEQAALILALVR
NPLRYAGSRYQPLLARLNIERLKSFALSQQVTTTHEKSGVQGESLLQRFTHNLTQQARDG
TLDPVLCRDTAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIVAQEVPAALQGV
ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGADA
ANLLKPALARGELRTIAATTWVEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAQ
VYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPERLEHL
RGKLAEGKRQYQALRRDAEAGLLVEQSALDALRVHLAEVDEEQQVLAERWHEQRSLAERL
LELRQRLAEAREIGMHEQAQDAAAEQHSIEALETLLHDTHQALCEAQAQERLVSFEVCPR
LVAEVISAWTGVPLAQLAWEHNAKVARFATDLRARIRGQEQAVQALDRAMRATAAGLNKP
DAPAGVFLLVGPSGVGKTETALALADLLYGGERFITTINMSEFQEKHTVSRLIGAPPGYV
GYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGVANDGEGREIDFRNTLI
LMTSNLASERISALCLHGERPTAEALEDAIRPTLSQHFKPALLARMRVVPYYPMDATVLR
ELIEIKLQYLGERLTRRQLTFSYSPCLVDHLAERCTESDSGARLIDHLLDRHLLPHVADR
MLASMATGERLSRVHATFDNSAGVVCEFV
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgtagatctgcaacaactcatccaggccctggacaccgaaacccgccgagac
cttgaacgcgcggctgagagttgtgtctcccgtggtggtagcaaggttctggttgaggac
ctgttattggggttgctggagcgtccgcacggcttgcttgcacgagccttgagagacgct
gaagtcgaagcgggtgagctgagtgccgtgttacaggtgcaggccgagcacagtgcttcg
cgtaatccggtgttcgctcctgaactggtgcaatggctgcaggacgccttgcttgtggca
aacctggatctggggcagagccaggtcgagcaggccgccctgattctcgctttggtgcgt
aacccgctacgttatgccggtagccgctaccagcctttgctggccaggttgaacattgag
cggctgaagtcattcgccctgtcgcaacaggtcaccactacccatgaaaaatccggtgtt
cagggggagtcgttgttgcagcgtttcacccataacctgacgcagcaggcgcgtgacggc
acgcttgacccggtcttgtgtcgcgatactgcgattcgccagatggtcgatatcctcgcc
aggcgtcgcaagaacaatccaatcgtggtcggtgaggctggcgtcggcaagacggccatc
gtggagggactggcttcgcgcattgttgcccaagaggtgccagcggcgctccagggggtt
gaactgctgtcgcttgatatgggcctgctgcaagccggagcgagtatcaaaggcgaattc
gaacgccgcctcaagggggtgatcgatgaggtcaaggcttcgccgaaaccgatcattctg
ttcatcgatgaagcccacacgctgattggtgccggtggcaatgcaggtggggcggacgct
gccaatctgctcaagcctgcgttggccaggggagagttgcgcaccatcgcagcgactacc
tgggtcgagtacaaaaaatactttgaaaaagaccccgccctggcacggcgatttcagccg
gtgcaattgcatgaaccaacggtcagcgaggcggtgaccattctgcgtgggctggcgcag
gtctatgagaaaagccacggcatctacctgcgtgatgatgccgtggtggctgccgctgaa
ttgtcggcacgttacctggccggccgacagttgccggacaaggccgtcgatgtactcgat
accgcgtgtgcgagggttcggatcagtttggccgcagcgccagagcgcctggaacacttg
cgcggcaagctggccgaaggcaagcgacagtatcaggcgttgcgccgcgatgccgaagca
gggttgcttgttgagcagtcggctctggacgcattgcgggtacatctggcagaagtggac
gaagaacagcaggtattggcggagcgttggcatgagcagcgcagcctggccgaacggctt
ctggagctgcgccagcgattggctgaggctcgcgaaatcggtatgcacgagcaagctcag
gacgccgccgcggagcaacacagcatcgaggcgctggaaacgctacttcatgatacccac
caggcgttgtgtgaggctcaggctcaagaacgcctggtcagctttgaggtgtgccctcgt
ttggtggcggaagtgatcagcgcctggacgggcgtaccgttggcacaactggcctgggag
cacaacgccaaggtcgctcgttttgccactgacctgcgagcacgcattcgtggccaggag
caggctgtacaggcactggaccgtgccatgcgtgccactgccgcagggctgaacaaaccc
gatgcaccggcaggggtgtttttgctggtggggcccagtggtgtcggcaagactgagact
gcattggcgctggccgacctgttgtacggtggcgaacggttcataaccaccatcaacatg
tccgagtttcaggaaaaacacacggtttcgcgcctgatcggagcgccgccaggttacgtg
gggtatggcgaggggggcatgctcaccgaagctgtgcgacagaagccttattcggtggtg
ctgctcgatgaagtcgaaaaggccgaccccgatgtcttgaatctgttctatcagatcttc
gacaagggcgttgccaatgatggtgaggggcgcgaaatcgattttcgcaacaccctgatt
ctgatgacctcgaacctggccagcgagcgtatcagtgcactctgtctgcacggcgagcgg
cctactgccgaggcgctggaagacgccattcggccaacactcagtcagcacttcaagccg
gcgttgctcgcgcgcatgcgtgtggtgccgtactacccgatggacgcaacggtgcttcgt
gagctgattgaaatcaagctgcagtacctgggcgagcgtttaaccaggcggcaattgacg
ttcagctacagcccttgcctggtggatcacctggctgagcgctgtaccgagagtgatagc
ggtgcgcgcttgattgatcacctgcttgaccggcacctgttgccgcacgtggccgaccgt
atgctggcgtcgatggccacaggtgaacgtctctcacgggtgcatgcgacgttcgacaat
agcgcaggcgtggtgtgtgagtttgtctga
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