KEGG   Pseudomonas defluvii: QEP73_11300
Entry
QEP73_11300       CDS       T10501                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pdeu  Pseudomonas defluvii
Brite
KEGG Orthology (KO) [BR:pdeu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pdeu03000]
    QEP73_11300
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdeu02044]
    QEP73_11300
Transcription factors [BR:pdeu03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    QEP73_11300
Secretion system [BR:pdeu02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   QEP73_11300
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_50 HTH_30 GAF AAA_16 GAF_3 AAA_2 GAF_2 AAA_7 AAA
Other DBs
NCBI-ProteinID: WJM98869
LinkDB
Position
2471555..2473072
AA seq 505 aa
MFTRVAQPLIYAEAVLAQFASLSRVTDEGALLADFVRATASLSGCELSQLYLLDATHTTL
GLSAEWLDGVLQPREMATLSADYNGEQLLQFALCQNREVSISDLSGGIHEISFLPRHAKA
WRSLLCVPLSNRQQAVAGVLLCASCRPVDLQGFACSLSVLGRFVLGQLHLLQRRLWSSSD
VPPASEPVICSGAYGLIGKSAGMRQTYQLISKVLHTPYTVLLQGETGTGKDVVARAIHDY
GPRRSKAFVAQNCAALPEQLLESELFGYRKGAFSGANSDRVGLFEAANGGTLLLDEIGDM
PLTLQAKLLRVLQEGEIRPLGANQTQRIDVRIIAATHRDLLARVREGAFREDLYYRLAQF
PITLPALRQREGDLRELALHFANKACAFLQREPLKWSDAAFERLGGYSFPGNVRELKGLV
ERAVLLCDGGELCSEHFTLTTDTLPQAPARSLRECLEQVERKLLLDCLRKHGGNQTLVAR
ELGLPRRTLLYRLGRLSIPQGGVDG
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtttacgcgagtagcgcaacccttgatctatgccgaggcggtgctggcgcagtttgcc
agcttgtcgcgtgtgacagacgaaggtgcgttgttggccgatttcgtccgggccaccgct
tcgctcagtggttgtgagttgagccagttgtacctgcttgatgccactcataccacatta
gggctgagtgcagagtggctggacggtgtactccagcctcgggaaatggccacgttgtct
gcagactacaacggtgagcaattgttgcagtttgcgctgtgccaaaaccgagaggtcagt
atcagcgacctgagcggtggcatccatgaaatcagttttcttccacggcacgccaaggca
tggcgctcgttgttgtgtgtgccgctgagcaatcgccagcaggccgttgcaggcgttctg
ctgtgtgccagttgcaggcctgtcgatctgcagggctttgcctgttccctgagcgtcctt
gggcgctttgtgctcggccagttgcatctattgcaacggcgcctgtggtcctccagtgat
gtgccaccggcatcagagccggtgatctgttcgggtgcttatggcctgatcggcaagagt
gccggaatgcgccagacctatcagttgatcagcaaggtgttgcacaccccatataccgta
ttgctacaaggcgagacgggtaccggaaaagatgtggtggcacgggcaattcatgattat
ggcccgcgccgatcaaaggcctttgtcgcgcagaattgtgcggcgcttccggagcaactg
ctggagagtgaactgttcggttatcgcaagggcgcgttttccggtgccaacagtgaccgg
gtagggctgttcgaggctgctaatggcggcaccttgctgctggatgaaattggcgacatg
ccgctcacccttcaggccaagttgctgcgcgtattgcaggaaggcgagattcgtccgttg
ggggccaatcagacgcaacggatcgacgtgcggatcattgccgcgacccaccgtgatcta
ttggcacgggttcgtgaaggggcgtttcgtgaagacctctattaccgcctggcgcagttt
ccaatcacgctaccggccttgcgccaacgcgaaggtgatttgcgtgagctggctttgcac
ttcgctaacaaggcctgcgcattcctgcagcgtgagccactgaaatggtcggatgcggca
tttgaacgccttggcggatacagctttccgggcaacgtcagagagctcaagggcctggtc
gaacgggccgtattgctgtgcgacggcggtgagctgtgcagcgagcacttcaccttgact
accgacacgttgccgcaggcgcctgcccgtagcctgcgtgaatgcctggagcaggttgag
cgcaaattgttgcttgattgcctgcgcaagcatggcggtaaccaaaccctggtggcacgc
gaactcggcctgccacgccgcaccctgttgtatcgactcggacgcttgagcatcccgcag
ggcggtgttgacggttag

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