Pseudomonas defluvii: QEP73_11320
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Entry
QEP73_11320 CDS
T10501
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QEP73_11320 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdeu02044
]
QEP73_11320 (tssK)
Secretion system [BR:
pdeu02044
]
Type VI secretion system
Imp/Vas secretion system core components
QEP73_11320 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WJM98686
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Position
2475011..2476342
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AA seq
443 aa
AA seq
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MNRDKVIWQEGMLLRPQHLQHNDRYYDYQMRSRTHLLGSYMWGFLRLEIDQQFLKMGKLA
ISQASGILPDGSLFELGGEGQPLVLDVPPSTGNTPVYLALPLITGHHIEARRPEQSDVLA
RYTHYETEVADSNAGADSSRVISCARPDFRLLLGEQQSDQAYVKLKICEVFDTSADGAIT
LAEDFVPTFINAQASGYLLSCLKEVISLLAHRGDALAERIRSNGKVGGAEVGDFMMLQLI
NRTELVLRHFLDIEQVHPEVLYRTLLAMLGDLATFSSEHKRPHLDSRYQHSDQGSSFRSV
MNAIRQVLSMVLEQHAIELELQVRQYGVLVSPLNDPTLLDSASFVLAASAHCDGDELRQR
LPAHLKVGAVEQIRQLVNLHLPGIKVRPLPVAPRQIPFHANKSYFILELSVEERSQLESS
GGFAFHVSGEFAELELAFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacagggacaaagtcatttggcaggaaggcatgttgctgcgcccgcagcaccttcag
cacaacgaccgttactacgactatcaaatgagaagccgaacccatctgctgggcagttac
atgtggggatttttgcgattggagatcgaccagcagtttctcaagatggggaagttggcg
attagccaggcgtccggcatcttgccggatggcagtctgtttgaactggggggcgagggg
cagccgttggtgctcgatgttccacccagtacgggtaatacgccggtctacctggcattg
ccattgatcacgggtcatcacatcgaggcgcgccggccggaacaatccgatgtgctggcg
cgttacacccactacgaaaccgaggtcgcagactccaatgccggtgctgattccagccgg
gtgatcagttgcgcacgtccggattttcgcttgttgctgggtgagcaacagagcgatcag
gcctatgtgaaattgaaaatatgcgaagtgttcgacacctcggcggatggagccatcacg
cttgcagaggactttgttccgaccttcatcaatgcccaggcgtctggctatttgttgtcc
tgcctgaaggaagtcatcagcctgttggcccatcgaggggacgccctggcggagcggatc
cgctctaacggcaaggtgggcggcgccgaggtgggggacttcatgatgctgcagttaatc
aaccgaaccgagttggtgttgcgtcactttctggatattgagcaggtgcatcctgaggtc
ttgtaccgcacgctactggcgatgctcggggaccttgcaaccttctccagtgagcacaaa
cgcccgcacctggacagccgctatcagcacagtgaccagggctccagctttcgcagcgtg
atgaatgccatccgtcaggtgctgtcgatggtgcttgagcagcatgccatcgaacttgag
ctgcaagtgcgccaatacggtgttctggtctccccactgaatgaccctacgctgctggac
tcggcctcgtttgtgcttgccgccagtgcccattgtgacggcgacgaactgcgccagcgt
ttgcctgcacacctcaaggtcggcgccgtggagcagattcgacaattggtcaacctgcac
ctgccgggtatcaaggtcaggccgttgccggtggccccacggcaaattccgtttcacgcc
aacaagagctatttcatcctggaactgagtgttgaagagcgttcccagctggagagctcg
ggtggtttcgccttccatgtgtcgggtgagtttgccgaacttgaactggctttctgggcg
atcaggaattga
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