Pseudomonas defluvii: QEP73_11430
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Entry
QEP73_11430 CDS
T10501
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu00061
Fatty acid biosynthesis
pdeu00071
Fatty acid degradation
pdeu01100
Metabolic pathways
pdeu01212
Fatty acid metabolism
pdeu02024
Quorum sensing
pdeu04146
Peroxisome
Module
pdeu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
QEP73_11430 (fadD1)
00071 Fatty acid degradation
QEP73_11430 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
QEP73_11430 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
QEP73_11430 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pdeu01004
]
QEP73_11430 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdeu04147
]
QEP73_11430 (fadD1)
Enzymes [BR:
pdeu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
QEP73_11430 (fadD1)
Lipid biosynthesis proteins [BR:
pdeu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
QEP73_11430 (fadD1)
Exosome [BR:
pdeu04147
]
Exosomal proteins
Exosomal proteins of breast milk
QEP73_11430 (fadD1)
Exosomal proteins of breast cancer cells
QEP73_11430 (fadD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
WJM98708
LinkDB
All DBs
Position
2501933..2503630
Genome browser
AA seq
565 aa
AA seq
DB search
MIENFWKDKYPTGIAAQINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYELSG
AFAAWLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLNKGRGQPIKEANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGSHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNADFRKLDFSALKITLSGGMALQMSVAERWRDVTGCAICEGYGM
TETSPVAAVNPAERNQIGTIGIPVPSTLCKVIDDDGHELALGEVGELCIKGPQVMKGYWQ
REDATAEILDADGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKLFIVARPGVTLTKEQVMEHMRANVTGYKVPRFIEFRDALPT
TNVGKILRRELRDEELKKLGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaacttttggaaggataagtacccaaccgggattgccgcgcagatcaatccg
gatgagtacccgaatatccaggcggtattgaagcagtcctgccaacgtttcgctgataaa
ccggcctttagcaacctgggcaaaaccttgacctacggagagttgtacgaactttccggg
gcatttgccgcctggttgcaacagcacactgacttgcagcccggcgatcgtatcgcggtg
cagttgccaaacgtattgcagtaccccgttgcagtgttcggtgccatgcgggccggcctg
atcgtggtcaataccaacccgttgtataccgcacgggaaatggaacatcagttcaatgat
tccggcgccaaggcgctggtctgtttggccaacatggcacacctggcggaaaaggttgtg
cccaagacccaagtcaaacacgttattgtcaccgaagttgccgatctgttgccaccgctc
aagcgtttgctgatcaacagcgtcatcaagtacgtgaaaaagatggtgccggcgtaccac
ctgcccaaggcggtcaagttcaatgatgtcttgaacaagggccgtggtcagccgatcaag
gaagccaatccggccagttccgatgtggcggtattgcagtacaccggcggcaccaccggg
gtggccaaaggggcgatgctcacccaccgcaacctggtggccaacatgctgcagtgcagg
gcgctgatgggctccaacctcaatgaaggctgcgagatcctgattacgccgctgccgctt
tatcacatctatgccttcaccttccattgcatggcgatgatgctgattggcagccacaac
atcctgatcagcaacccgcgtgatttgccggccatggtcaaggagctgtcgaagtggaag
ttcagcggctttgtcggcttgaacaccctgttcgtggccctgtgcaataacgccgatttc
cgcaagctggatttctcggcgctgaagatcaccctgtcgggaggcatggcgttgcagatg
tcggttgccgaacgttggagagacgtcacaggttgtgccatttgtgaaggctacggcatg
accgaaaccagcccggtagccgccgtcaacccggccgaacgcaaccagatcggcaccatt
ggcattccggtgccctcgacactctgcaaggtgatcgatgatgacgggcatgaactggca
ctgggcgaagtgggtgagttgtgcatcaaaggcccgcaagtgatgaagggctactggcag
cgcgaggatgcgacggccgagatcctcgatgccgatggctggctcaagaccggcgacatc
gccgtgattcaggcagacggttacatgcgcatcgtcgaccgcaagaaggacatgattctg
gtgtccggcttcaacgtctatccgaacgaacttgaggatgtgctggctgcgctgccgggt
gtattgcagtgcgcggcaatcggcgtgccggatgagaagtctggtgaagtgatcaagctc
ttcatcgttgcccgccccggcgtcacgctgaccaaggagcaggtgatggagcacatgcgc
gccaacgtcacaggttacaaggtgccgcgcttcattgagtttcgtgatgcactgccgacc
accaacgtcggcaagatcctgcgccgcgaactgcgcgatgaagaactgaagaaactgggt
ctgaagaagattgcctga
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