Pseudomonas defluvii: QEP73_11515
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Entry
QEP73_11515 CDS
T10501
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pdeu Pseudomonas defluvii
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdeu03009
]
QEP73_11515
Enzymes [BR:
pdeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QEP73_11515
Ribosome biogenesis [BR:
pdeu03009
]
Prokaryotic type
rRNA helicases
QEP73_11515
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WJM98725
LinkDB
All DBs
Position
2523583..2524908
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AA seq
441 aa
AA seq
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MFSQFALHERLLKAVAELNFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLN
RLVDLKQKRVEIRALILLPTRELAQQTLKEIERFAQFTFIKAGMITGGEDFKEQAAMLRK
VPDILVGTPGRMLEQLNAGNLKLEHVQVVVLDEADRMLDMGFSEDVERLCNECPNREQTL
LFSATTGGAGLREMIGKVLKTPEHLMLNNVSQLSEGTRQQIITADHNQHKEEIVQWLLAN
ETYQKAIIFTNTRVMADRIYGHLVAKDFKAFVLHGDKDQKDRKLAIERLKQGGAKVLVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNEGLAISLICHGDWNLMSSIER
YLKQSFERRVIKEVKGTYSGPKKVKASGKAVGVKKKKTDKKGDKKAVAKKKPANRPKASA
PLVSQDGLAPLKRRKPAPAAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgcttaaagctgtggccgagctgaacttt
gtcgagccgacgccggtgcaggcagcggccattcccctggcgctgcaagggcgtgacctg
cgggtgacggcacaaaccggcagcggcaagacagcagcctttgttctgcctgtgctcaac
cgcctggtcgatctgaaacagaagcgtgtcgagatccgtgccctgatcctgttgccaacc
cgtgagctggcccagcaaaccctcaaggaaatcgagcgtttcgctcagttcaccttcatc
aaggccggcatgatcaccggtggtgaggacttcaaggagcaggccgctatgctgcgcaag
gtgcctgatattctggttggcaccccagggcgcatgctcgaacagctcaatgccggcaac
ctgaagctggagcacgtgcaggttgttgtgcttgatgaagccgaccgcatgctcgacatg
ggcttttccgaagacgtcgagcggctgtgcaacgagtgccctaaccgtgaacagaccctg
ctgttctccgccaccaccggcggcgcgggcctgcgtgaaatgatcggcaaagtgctgaag
acccctgaacacctgatgctcaacaacgtcagccagctcagcgaaggtactcgccagcag
atcattacggccgaccacaaccagcacaaggaagagatcgttcagtggctgctggccaac
gagacctaccagaaggccatcatcttcaccaacacccgggtcatggccgaccgtatctac
gggcacctggtcgccaaggacttcaaagccttcgtgctgcacggcgacaaggaccagaaa
gaccgcaaactggccatcgaacgcctcaagcagggcggggccaaggtgctggttgccact
gacgtcgcggcccgtggcctggacgttgatggcctggacctggtgatcaacttcgacatg
ccgcgcagtggcgacgagtacgttcaccgcatcggccgtaccggtcgtgccggcaatgaa
ggcctggccatctcactgatctgccatggcgactggaacctgatgtccagcatcgagcgc
tacctgaagcagagcttcgagcgccgggtcatcaaggaggtcaagggcacctacagcggt
ccgaagaaggtcaaggcatcgggcaaggcggtaggggtcaagaagaaaaagactgacaag
aaaggtgacaagaaagccgtcgccaagaaaaagcctgccaaccggccaaaagccagcgca
ccgctggtaagccaggatggcctggcccccctgaagcgtcgcaagccagccccagctgcc
gagtaa
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