Pseudomonas defluvii: QEP73_11575
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Entry
QEP73_11575 CDS
T10501
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEP73_11575 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdeu03019
]
QEP73_11575 (recQ)
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_11575 (recQ)
Enzymes [BR:
pdeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEP73_11575 (recQ)
Messenger RNA biogenesis [BR:
pdeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QEP73_11575 (recQ)
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QEP73_11575 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
HTH_23
IF2_N
GerE
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
WJM98737
LinkDB
All DBs
Position
2535699..2537831
Genome browser
AA seq
710 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIECVAKGGDALVLMPTGGGKSLCYQVPGLLRNGLA
VIVSPLIALMEDQVATLDELGVAAASLNSTLSAEQQRELAGKIRRGEIKMLYLAPERLVQ
PRMLDFLRDLEIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEIVTRLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLMAFLGERRGNAGIVYCLSRKK
VDDVAAFLCDQGFPALPYHAGLPAETRASNQRRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK
LDAMLALCEETRCRRQILLNYFDEELQQPCGHCDNCVDSVQTWDATEPARQALSAIYRTG
QRYGVGHLIDVLLGRDNEKVRSFGHQQLSVFGVGKARQEGEWRSLFRQLVARGLADIDLE
GYGGLRLSDSCRPLLRGEVNLELRRDLKPQTSKGTGSSGSPASQLVRGEEREQWEALRAL
RRKLAEEHGVPPYVIFPDSTLLEMLRSQPSSLSEMARVSGVGARKLERYGQAFLEVLGGE
AETPRVVVDLRHELVTLARAGMTPIQIAGQLQCSEKNVYSLLAEAIGRQELSLEQALDLP
EDLLLELQDAFLDGEGELPPVSAIAGQFGARVPEGVLYCVRAALAAEFEM
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgtcctcaaggatatcttcggctacgacagtttccgtggt
cgccagggtgcgatcatcgaatgtgtggccaagggcggggacgccttggtgctgatgcct
accggcggtggcaagtcgctctgctatcaggtgccagggttgctgcgcaatggtctggcg
gtgattgtctcacccctgattgccctgatggaagaccaggttgcaaccctcgatgagctg
ggggtggcggctgcctctctgaactcgaccctgagtgccgagcagcagcgcgagctggcc
gggaagatccggcgcggcgaaatcaagatgctctacctggcgcctgagcgtctggttcag
ccgcgtatgctggatttcctgcgcgacctggagattgcgctgttcgcgattgacgaggcg
cactgcgtatcgcaatggggccacgatttccgtccggagtacctgcaactggggcagttg
gccgaactgtttccgcacgtgccgcgtattgccctgacggccacggccgacatgcgtacc
cgcgaggaaatcgttacccgtctgcatttgcagaatgccgagcgctttctgtcgagtttc
gatcggccgaacattttctatcgcatagtgcccaaggagcagccacgcaagcagttgatg
gcgttccttggcgagcgccgtggcaacgccggtattgtctactgcctgtcgcgaaagaaa
gtcgacgatgttgcagccttcctctgtgatcagggcttcccggccttgccctaccatgcc
ggtcttcccgctgaaacccgtgccagcaaccagcggcgcttcctcaacgaggagggcctg
atcatggtcgcgaccattgcgttcggcatgggtatcgacaagcccaacgtgcgttttgtc
gctcacctcgacttgcccaagtcactggaggcctactatcaggaaaccggtcgcgccggc
cgtgacgggctgcccgccgatgcctggatggcctacggcctgcaggacatggtgatgctc
aagcagatgctgcaaaactccgagggtgatgagcgccacaagcgcatcgagcagcacaag
ctcgacgccatgctggccttgtgcgaggaaacccgctgtcggcgtcagatattgctgaac
tacttcgacgaagaacttcagcagccatgtggtcattgtgacaactgcgttgacagcgta
cagacctgggacgcgaccgagccggcacgccaggccctttcggccatctaccgtacgggg
cagcgctatggtgttggccatttgatcgacgtattgctcggtcgtgataacgaaaaagtg
cgtagttttggccatcaacagttgtcggtgtttggcgtcggcaaggcgcgccaggaaggg
gagtggcgctcgctgttccgtcaactggttgcccgaggcctggctgatatcgaccttgaa
gggtatggcggcctgcgcctttccgacagttgccgcccgttactgcgtggcgaggtcaac
ctggagttgcgtcgagatctcaaaccgcagaccagcaaaggcactggcagctccggcagc
ccggcgagccagttggtgcgtggtgaagagcgcgagcaatgggaggccctgcgtgcgctg
cggcgcaagttggccgaggagcatggcgtaccgccttacgtgatcttccccgactcgacg
ttgctcgaaatgctgcgcagccaaccgagcagcctgagcgaaatggcccgggtcagtggt
gtcggtgcgcgtaagctggagcgctacggtcaggccttccttgaggtgcttggtggcgag
gctgaaacgcccagggttgtggtcgatctgcgtcacgagttggtaaccctggcccgtgcc
ggcatgacaccgatccagatcgccggccaactgcaatgcagtgaaaaaaacgtctacagc
ctgctggccgaagccattggtcgtcaggaactgtcactggagcaggcgctggacttgccg
gaagacctgttgcttgagcttcaggacgcgttccttgatggcgagggggagttgccgcca
gtttcggcgattgccgggcagttcggggcgcgggtgcccgaaggggtgttgtactgcgtt
cgggctgccctggccgctgaatttgagatgtaa
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