Pseudomonas defluvii: QEP73_12155
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Entry
QEP73_12155 CDS
T10501
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu02020
Two-component system
pdeu02025
Biofilm formation - Pseudomonas aeruginosa
pdeu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QEP73_12155
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QEP73_12155
09142 Cell motility
02040 Flagellar assembly
QEP73_12155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdeu03000
]
QEP73_12155
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pdeu02035
]
QEP73_12155
Transcription factors [BR:
pdeu03000
]
Prokaryotic type
Helix-turn-helix
Other families
QEP73_12155
Bacterial motility proteins [BR:
pdeu02035
]
Flagellar system
Flagellar assembly proteins
Others
QEP73_12155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
AAA_22
nSTAND3
bpMoxR
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WJM94363
LinkDB
All DBs
Position
2650535..2652010
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVVLNFLGEDNLPCSSQDWQQVVESLSSSREVLCVLIGAV
NAPASLSGLLKTVAAWDEFLPVLLLGEISSVDLPEELRRRVLSSLEMPPSYSKLLDSLHR
AQVYREMYDAARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRYVDDEEEHLVDSLRSDLEERVAINGHTPN
FSHHAMLPPEGLDLKDYLGSLEQGLIQQALDDAGGVVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctcctgatcgatgacgacagtgttcgccgccgcgatttg
gcggtggtcctgaattttctcggcgaagacaatttgccctgctcaagccaggactggcag
caggtcgtcgagtcgttgtcatccagtcgtgaagtactttgcgtcctgattggtgctgtg
aatgctccggcaagtctttcgggcttgcttaagacagtggcagcctgggatgagttcctt
cccgtgttgctattgggcgaaatttcttcggtcgacctgcccgaagagttgcgccgccgc
gtgctgtccagtcttgaaatgccgcccagctacagcaaattgctggactcgttgcaccgt
gcccaggtgtatcgcgagatgtacgatgccgcccgtgagcgtggccgacagcgtgaaccg
aacctgtttcgcagcctggtcggcaccagccgtgcaatccagcatgtgcggcaaatgatg
cagcaagtagccgataccgacgccagtgtattgatcctgggcgagtcgggcaccggcaag
gaagtggttgcacgcaaccttcattatcattccaagcgccgcgaagcgccgttcgtgccg
gtcaactgcggcgcgatcccggcagagctgctggaaagcgaattgttcggccatgagaag
ggcgctttcaccggcgctatcaccagccgtgccgggcgtttcgaattggccaatggcggc
accctgttcctcgatgaaattggcgatatgccgctgccgatgcaggtcaagttgctgcgg
gtgttgcaggagcgaaccttcgagcgcgtgggtagcaacaagacccagagcatcgacgtg
cgaatcattgcggcgactcacaagaacctcgagagcatgatcgaggtaggctccttccgc
gaagacctgtactaccggcttaacgttttcccgatcgagatggctcccctgcgagagcgt
gtcgaagacatcccgttgttgatgaacgagttgatctcgcgcatggagcacgaaaagcgt
ggctctatccgcttcaactcggcggcgatcatgtcgctgtgtcgtcatggttggccgggc
aacgtccgcgagctggccaacctggtcgagcgcatggcgatcatgcacccttatggggtg
atcggggtctccgagctgcccaagaaattccgttatgtcgatgatgaagaagagcatctg
gtcgacagtttgcgctctgatcttgaggagcgcgtggcaatcaatgggcacacgccaaac
ttctcccatcacgccatgctgccgcccgaagggttggacctcaaggattacctcggcagc
ctcgagcagggcttgatccagcaggcgctggatgatgccggtggcgtggtggcacgtgcc
gcggagcgtttgcgtatccggcgtaccaccctggtagaaaaaatgcgcaagtacggcatg
agtcgacgtgagggtgacgagcaggcagaagattga
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