Pseudomonas defluvii: QEP73_17700
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Entry
QEP73_17700 CDS
T10501
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QEP73_17700 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdeu02044
]
QEP73_17700 (tssK)
Secretion system [BR:
pdeu02044
]
Type VI secretion system
Imp/Vas secretion system core components
QEP73_17700 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WJM95392
LinkDB
All DBs
Position
complement(3844317..3845657)
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AA seq
446 aa
AA seq
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MLSNDGVVWSEGMFLQPQHFQQQQRHVQAQLVQGLQAVQANVWGFSALKLDPAQLLLGRI
QLLECAGVLPDGTLFSLDSQGLAQAGFVVPEGARGLDVVLALPRAGAAHIDVEHASAADS
LSRYHRLEATVQDSTAEGAAEATLQLARLNLRLARRQDVEQSHVYLDVARVLERSSGGQV
SLDEAFIAPVLNWRLAPRLAAFVDDFLGRVRQRGYMLATNMGVPGLGGIAEVHHFLMLQT
INRAEPMLAHLASYPGLHPEVLFRELVALAGELAIFSETSKRPKSYPVYRHDRLADSFDP
VMIDLAHILSAQAGTDVVPLALNEREHGIRVAAVLDTSLYGSARFVLAVRAQVPDDELRK
VFPTCLKVGPSERVADLVDLQLPGINVCVLPAAPRELPYYAGFSYFELQRDNPLWQALGS
SAGFGLHVAGDFPGLQLAFWAIKEPQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcaatgacggcgttgtctggtcggaaggcatgttcctccagccgcaacatttc
caacagcaacaacgccacgtgcaggcgcagttggttcaagggttgcaagcggtacaggct
aacgtctgggggttcagcgcactgaaactcgacccggcgcagttgctcctagggcgaatc
cagttgctcgagtgtgcaggtgttctacccgatggcacgctgttcagcctcgatagccaa
ggcctggcgcaggccggcttcgttgtccctgagggtgcacgcgggcttgacgtggtattg
gccttgcccagagcgggcgccgcacacattgacgtcgagcacgcgtctgccgccgacagc
ctgtcgcgctaccatcggctggaggccacggtgcaggacagcaccgccgagggtgccgca
gaggcgaccttgcagcttgcccggctcaacctgcgcctggcacgtcggcaggacgtcgag
cagtcacatgtgtacctggatgtcgcccgggtgcttgaacgcagttccggtggccaggtc
agcctggatgaggccttcatcgcaccggttctgaactggcgcctggcgccgcggctggct
gcatttgtggatgacttcctcggccgtgttcggcagcggggctacatgttggcgaccaac
atgggcgtaccagggctgggcggaatcgccgaggtccatcattttctgatgctgcagacg
atcaaccgagccgagccgatgctcgcccacctggccagctacccaggcttgcaccccgag
gtcctgttccgtgagttggtcgccctagctggtgagttggcgattttctctgaaaccagc
aagcggccaaagtcctatccggtgtaccggcatgatcggctcgccgacagcttcgacccc
gtcatgatcgacctggctcatatcctcagtgcgcaggccggaaccgatgtagtgcccctg
gccttgaatgagcgtgaacacggtattcgtgttgccgccgtgctcgacaccagcctgtat
ggcagcgcccgctttgtacttgcagtgcgtgcgcaagtgccggatgacgaactgcgcaag
gtgttcccgacgtgcctgaaggttgggccaagcgaacgcgtcgccgacctcgtcgacctg
cagctacccggaatcaacgtctgtgttctgccggccgcgccgcgtgaactgccgtattac
gcaggcttcagctacttcgagcttcagcgcgacaacccgttgtggcaggcacttggcagc
agcgccggtttcggcctgcatgtggccggtgattttccgggcttgcaactggccttctgg
gcgatcaaggagcctcaatga
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