Pseudomonas defluvii: QEP73_17720
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Entry
QEP73_17720 CDS
T10501
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu02025
Biofilm formation - Pseudomonas aeruginosa
pdeu03070
Bacterial secretion system
Brite
Secretion system [BR:
pdeu02044
]
Type VI secretion system
Imp/Vas secretion system core components
QEP73_17720 (tssH)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WJM95395
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Position
complement(3849041..3851668)
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AA seq
875 aa
AA seq
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MTDISRAKLFGKLDTLAYQAMESATTLCRVRGNPYVELVHWFQLVLQQPDSDLRRINERF
GLNAGTLSSDLISALDRLPAQAASVVDLSAQLDEAMERGWLYGALQLDASRIRSGHLLLG
VLGTGSLRHTLFAMSREFEKINRETLLEQFHEIVQRSPEQPVLPGDGALADQPREASSTL
QRYTSDLTEQARLGNLDPVLGRNEEVRQLIDILMRRRQNNPLLAGEAGVGKTAVVEGFAQ
RIVAGDVPEAFLGARVLALDIGLLQAGASVKGEFEQRLRQVVDEVQAATQPTLLFIDEVH
TLVGAGGQAGTGDAANLLKPMLARGKLRTIGATTWSEYKKHIEKDPALKRRFQVLRVDEP
SPEVAITMLRSVLPTLQRHHRVQILDEAVVAAVHLSHRYLPDRQLPDKAISLLDTACARV
GISQQAMPAQLADSRERIANLRAEKVVVQTEQAIGLLDPERLQRLSQQLRDEQQRSAELE
KRWQAQTAWVGEIQQLRERLCTEHLAPSVEQAELQAAFLERTEALQQRLHAAQSEVPALV
LTDVDAQSVASVLQGWTGIPLGTLQRNEIETILNLAERLGERVIGQSHAMEAIARRIQTS
RAGLDHPGKPVGVFLLAGPSGVGKTETALALAELLYGGEHNLVTINMSEYQEPHTVASLK
GAPPGYVGYGEGGVLTEAVRRRPHCVILLDEIEKAHPDVHEVFFQVFDKGWMEDGEGQVI
DFRNTLILMTTNVGSEVLFNRQGTETDQDLEQRLKPELLRVFPPALLGRLVAIPYFALND
DMLARIVELQLKRVAARVEQRYQVPLHYDAVLVDYIVSQCTDIHSGGRMVDSILTNGLLP
QLSRAFLLGEINQTVPQRVSLSVGDAGIIYEFAND
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcagccgcgccaagctttttggaaagctcgacaccttggcttatcaggcg
atggagtccgccacaaccttgtgccgggtacgaggcaacccttacgttgagctggtgcat
tggttccagctggtgctgcaacagccagactccgacctgcgacgcatcaacgagcgcttc
ggcctgaacgcgggcacgctttccagcgatttgatcagcgccctcgaccgcttgcccgcg
caggcggcctcggtcgtcgacctttccgctcagttggacgaagccatggagcgcggctgg
ttgtatggggcgctgcaactggatgcgagcagaattcgcagcggtcacttgttgctcggt
gtgctgggtacgggaagcttgcggcataccttgttcgcaatgtcccgtgagttcgagaag
atcaatcgtgagacgctgctcgaacagttccacgaaattgtccagcgttcacctgagcag
cccgtgctacccggtgacggggcactagcggaccagccccgtgaagcatccagcacattg
cagcgttacaccagcgacctcaccgagcaggcacggcttggcaacctcgacccggtgctg
gggcgcaatgaggaggtgcgtcaactcatcgacattttgatgcgtcgacgtcagaacaac
ccattgctagccggtgaggcgggcgttggaaaaaccgctgtggtcgagggctttgcccag
cgaattgtcgccggtgacgtgcccgaagcgttcctcggggcccgcgtgctggcgctggat
atcggcttgttgcaggccggtgccagcgtcaagggcgagttcgagcagcgcctgcgccag
gtggtcgacgaggtgcaggcggccacgcaaccgacactcttgttcatcgacgaagtgcat
accctggtcggcgcaggcggccaggccggtaccggtgacgcggccaacctgctcaagccg
atgctggcgcggggcaaactgcgtacgatcggcgccacgacctggagcgagtataaaaag
cacatcgagaaggaccccgcgctcaagcgacgttttcaggtgctgcgggtagacgaaccg
agccccgaggttgcgatcaccatgttgcgcagtgtgctgcccacgttgcagcgtcaccat
cgggtgcagatcctcgatgaggcggtggtggctgccgtccacctgtcacaccgttatctg
cccgatcgccaactcccggataaagccatcagcctgctcgacaccgcctgtgcgcgggtt
ggtatcagtcagcaagcgatgcccgcacagctggctgacagccgcgagcgcattgcgaac
ctgcgcgctgaaaaagtggtggtgcaaacggaacaggccattggcctgctcgaccctgag
cgtctgcaacgcctttcgcagcaactgcgcgatgaacagcagcgcagcgctgagctggaa
aagcgctggcaggcgcaaaccgcttgggtcggcgagatccagcagttgcgcgaacgcctc
tgcaccgagcacctcgcgccaagcgtggagcaggctgaactgcaggccgcctttctggag
cgcaccgaagcattgcagcagcgcttgcacgccgcccagtctgaagtgcctgccctggta
ctgacggatgtcgacgcgcagtcggtggccagcgtgctgcaaggctggaccggcattccg
ctgggcaccctgcagcgcaatgaaattgaaaccattctcaacctcgccgagcgcctgggt
gagcgtgtcattggccaatcccatgcgatggaagcgattgcccgtcgtattcagacctcc
cgtgccgggctcgatcacccgggtaaaccggtaggggtgttcctgcttgccggcccttct
ggcgtaggcaagacggaaaccgccctggccttggcggaactgctgtatggcggtgaacac
aacctggtaacgatcaacatgagtgagtaccaggagccgcacacggtcgcttcgctgaag
ggcgcgccgccaggttatgtcggttacggtgaaggcggtgtcttgaccgaggcggtgcgc
cgtcggccgcactgcgtgatcctgctcgacgagattgaaaaggctcaccccgacgtccat
gaagtgttcttccaggtgttcgacaagggctggatggaagacggcgagggccaggtcatc
gattttcgcaataccttgatcctgatgactaccaacgtgggctccgaagtgctgttcaac
cggcaaggcaccgagacggaccaagaccttgaacagcggctcaagccggaactgctacgc
gtgttcccgcccgcgctgctcggtcgcctggttgccattccgtactttgcgctcaacgac
gacatgttggcccgtattgtcgagttgcaactaaagcgcgtcgccgcacgcgtagaacag
cgttatcaggtaccgctgcactatgacgcggtattggtggactatatcgtcagccagtgc
accgatatacacagtggtgggcgcatggttgattccattttgacgaatgggcttttaccg
cagctcagtcgcgcattcttgctgggcgaaataaatcagaccgtgcctcaacgggtcagt
ttatcggttggggatgcaggcattatttacgagtttgccaatgactaa
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