Pseudomonas defluvii: QEP73_17750
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Entry
QEP73_17750 CDS
T10501
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QEP73_17750 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdeu02044
]
QEP73_17750 (tssB)
Secretion system [BR:
pdeu02044
]
Type VI secretion system
Imp/Vas secretion system core components
QEP73_17750 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
WHD_PKMT
Motif
Other DBs
NCBI-ProteinID:
WJM95401
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All DBs
Position
complement(3857117..3857629)
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AA seq
170 aa
AA seq
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MSSNSGQKFIGRNRAPRVQIDYDVELYGAEKTVEIPFVNGVLTDLSGANTAHLPSVADRK
FLEIDIDNFDERMNAIAPSLKFAVKNELTGEGQLSIALDIKSMDDFSPGAIARNVEPLNK
LLEARNQLSNLLTYMDGKSGAEQLVAQLLQDPALMSSLLAQAKSPAQTTE
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaatagtgggcaaaagtttattggtcgtaaccgcgcgccgcgggttcagatc
gactacgacgtcgaactctacggggccgagaaaacagtagaaattccttttgtgaacggt
gtattgacggatttgtcgggtgctaatactgcgcacttgccgtccgtggccgatcggaag
tttctggaaattgatattgataacttcgatgagcgcatgaatgccattgcgccgtcgttg
aagtttgcagtcaagaatgagctgaccggcgaaggccagctgtccattgccctggatatc
aagagcatggacgacttcagcccgggcgctatcgcacgcaatgtcgaacccctcaacaag
ttgttggaggcgcgcaatcagctctccaacctcttgacctacatggatggcaagagtggc
gctgagcaactggtcgcgcagttgctccaggaccctgcgctcatgagttcgttgctggcg
caagcgaagtctcctgcccaaaccactgaatga
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