Pseudomonas defluvii: QEP73_18365
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Entry
QEP73_18365 CDS
T10501
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pdeu Pseudomonas defluvii
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdeu03000
]
QEP73_18365
Transcription factors [BR:
pdeu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QEP73_18365
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WJM95514
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Position
complement(4000301..4001509)
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AA seq
402 aa
AA seq
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MLADELPNLMQVRAFVRVAELGSVSKASEAVYRAQSVVTRAIAELEARLEVPLFERHVNG
MRLTDYGARVLPRARRVLAELETVPRLLEGAAGKAVEPLYLFQARRLQVFVKLCETCHMQ
TVARHFGLSQPAVSAALKVLEGGCGQSLFERTPRGLQPTRASHEIVFPIRRALNELRHIQ
ADITAMRGTLQGVVHVGALPLGRTRILPDAIVRLTAAHPGIRVITNESPFDLLATELRAG
DVDFILGALRSADYASDLVGEALLTEEMVILARRDHPLCSVPVGREALSEAHWVLPRGGS
PARQLLDAWFTDSGLAVPWPVVESGDLAIIRGLLLRSDMLAIVSAHQLEQDIASGALCIL
PVQLKQTTRAIGLTYRSGCLHSPAAQVMMTIIRQAIREQVDG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgttggctgatgagcttccaaacctgatgcaggtgcgagcgttcgttcgggtggctgaa
ctgggcagcgtgtcgaaggcctccgaggctgtttaccgggcgcagtcggtggtcacgcgg
gcaatcgccgagctggaggcgcgcctcgaggtgccgctgtttgagcggcatgtcaacggc
atgcgcctgaccgactatggcgcccgggtgctgccccgagcacggcgtgttctggcggag
ctggagacggtgccacggctattggagggggcagcgggcaaagcggtcgagccgctctac
ctgttccaggcccggcgcttgcaggtgttcgtcaaactctgcgagacctgccacatgcag
acggtggcgcgccattttggcttgagccaacctgccgtcagtgcggcgctgaaggtgctg
gagggtggttgtgggcaatcgctgttcgagcgaacaccacggggcttgcaaccgacgcgg
gccagccacgagattgtctttccgatccgtcgtgcgctgaacgaactgcggcatattcag
gccgatatcaccgcaatgcgcggcacattgcagggtgtggtgcatgtcggcgcgctgccg
ttggggcgtacccgcatactgccggacgccatcgttcggctcacggccgcgcaccccggc
attcgcgtgatcaccaacgagagcccgttcgacctgctggctaccgaactgcgggccggc
gatgtcgatttcattctgggggccttgcgttcggccgactatgcctcggacctggtcggc
gaggccttgctgacggaggaaatggtcatactggcgcgccgtgaccacccgctgtgcagc
gtgccggttggacgcgaagcgctcagtgaggcgcactgggtgttgccacggggcggctcg
ccggcgcggcaattgttggacgcgtggttcaccgactcgggcctggccgtgccctggccg
gtggtcgaaagtggcgacttggcgatcattcgcgggctgttgctgcgctcggacatgctg
gccattgtgtccgcccaccaactggagcaggacattgcctcgggggcgctgtgcatcctg
ccggtgcagctgaagcagaccacccgtgccattggcctgacttaccgcagtggttgcctg
cattcgcccgccgcgcaggtcatgatgacgatcattcgccaggcgattcgcgagcaggtg
gatggctaa
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