Pseudomonas defluvii: QEP73_20740
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Entry
QEP73_20740 CDS
T10501
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pdeu Pseudomonas defluvii
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdeu03032
]
QEP73_20740
03036 Chromosome and associated proteins [BR:
pdeu03036
]
QEP73_20740
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_20740
DNA replication proteins [BR:
pdeu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QEP73_20740
Chromosome and associated proteins [BR:
pdeu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QEP73_20740
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QEP73_20740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Barstar
ADH_zinc_N_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WJM95960
LinkDB
All DBs
Position
complement(4532963..4533235)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAVAGRALDAVIDSVTGALKAGDSVVLVGFGTFSVTDRPARTG
RNPQTGKTLEIPAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgacgctatcgctgcatctgctgacatcccgaaagctgta
gctggccgtgcgctggatgcagtaatcgactccgtcaccggcgccctgaaggcaggtgac
tcggttgtactggtaggcttcggcacgttctccgtgaccgaccgtcctgcgcgtaccggc
cgtaacccgcaaaccggtaagactctggaaatccctgctgccaagaagccaggcttcaaa
gctggtaaagcactgaaagaagccgtcaactaa
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