Pseudomonas defluvii: QEP73_21185
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Entry
QEP73_21185 CDS
T10501
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu00071
Fatty acid degradation
pdeu00280
Valine, leucine and isoleucine degradation
pdeu00310
Lysine degradation
pdeu00362
Benzoate degradation
pdeu00380
Tryptophan metabolism
pdeu00410
beta-Alanine metabolism
pdeu00640
Propanoate metabolism
pdeu00650
Butanoate metabolism
pdeu00907
Pinene, camphor and geraniol degradation
pdeu00930
Caprolactam degradation
pdeu01100
Metabolic pathways
pdeu01110
Biosynthesis of secondary metabolites
pdeu01120
Microbial metabolism in diverse environments
pdeu01200
Carbon metabolism
pdeu01212
Fatty acid metabolism
Module
pdeu_M00087
beta-Oxidation
pdeu_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QEP73_21185 (fadB)
00650 Butanoate metabolism
QEP73_21185 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QEP73_21185 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QEP73_21185 (fadB)
00310 Lysine degradation
QEP73_21185 (fadB)
00380 Tryptophan metabolism
QEP73_21185 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QEP73_21185 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QEP73_21185 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QEP73_21185 (fadB)
00930 Caprolactam degradation
QEP73_21185 (fadB)
Enzymes [BR:
pdeu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QEP73_21185 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QEP73_21185 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QEP73_21185 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QEP73_21185 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WJM96042
LinkDB
All DBs
Position
complement(4635166..4637313)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLPVPTVAAINGIALGGGLE
MCLAADYRVMASSAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGVVDAVVAPELLQAAALDLIKRAISGEFDHKAKRQPKLDKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAQSLIGLFLNDQEL
KRKAKAHDEIARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIIVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKRGKP
KKVADASVLEVLKPIIYEQRDVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMARNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaactg
cgtcaggccgtggacactatcaaggccgatgcatcgatcaagggcgtaattgtcagcagt
ggcaaggacgtgttcatcgtcggcgcggatatcaccgagtttgtcgataacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccgtattttcagcgatttcgaa
gatctgccggtgccgactgtggccgcgatcaacggcatcgccctgggtggcggcctggaa
atgtgcctggccgcggactaccgcgtcatggccagcagcgccaagatcggcttgcctgaa
gtcaagctggggatctacccgggctttggcggtacggtccgtctgccgcgcctgatcggt
gccgacaacgctatcgagtggattgccgccggcaaggaaaaccgggctgaagatgcactg
aaagtaggggtcgtcgatgctgtcgttgcgcctgaactgctgcaggctgcggctctggac
ctgatcaaacgtgccatcagtggcgagttcgatcacaaggccaagcgtcagccaaaactg
gacaagctcaagctcaatgcgattgagcagatgatgtccttcgagaccgccaagggcttc
gttgcgggccaggctggcccgaactacccggcgccggtcgaagcgatcaagaccattcag
aaagcggccaatttcgggcgtgacaaggccctggaagttgaggcagccggcttcgtcaaa
ttggccaagacctcggttgcccagagcctgatcggtctgttcctgaacgatcaggagctc
aagcgcaaggccaaggcccatgacgaaatcgctcgcgatgtgaagcaggccgcggtactc
ggcgccggcatcatgggcggcggtatcgcctatcagtcggcggtcaagggtacgccgatc
ctgatgaaggatattcgcgaggaagccattcagctgggcttgaacgaagcctccaagctg
ctcggcaatcgcgtcgaaaaaggccgtctgaccccggcgaaaatggctgaagcgctgaac
gcgattcgcccgaccctgtcctacggcgactttgccaacgtcgacatcatcgtcgaagcc
gtggtcgagaacccgaaggtcaagcaagcggtgctggctgaagtggaaggtcaggtgaag
gaggatgcgatcctggcttccaacacatcgaccatttccatcaacttgctggccaaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcatccgtggcgagaagtccagtgacgttgccgttgccaccaccgtggcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccttacttcggtggtttcgccaaactggtcagcgccggtgtcgac
ttcgttcgcatcgacaagatcatggagaagttcggttggccaatgggccctgcctacctc
atggacgtagtgggtatcgacaccggccaccacggtcgtgacgtgatggccgaaggcttc
cctgatcgcatgaaggacgaccgtcgttcggccgtcgatgtgctgtatgaggccaagcgc
ctgggtcagaaaaatggcaagggcttctatgcctacgagaccgacaagcgcggcaagccg
aagaaagtcgccgatgcatcggtgttggaagtgctcaagccgatcatctatgaacagcgc
gacgtgagtgatgaagacatcatcaactggatgatgatcccgctttgcctggaaactgtg
cgctgcctggaagatggcattgtcgaaaccgctgccgaagcggatatgggcctggtctac
ggcattggtttccctcccttccgtggcggtgcgctgcgctacatcgactcgatcggggtg
gctgagttcgttgccctggccgataagtacgccgatctggggccgctgtatcaccccacc
gcgaagctgcgtgaaatggcccgcaacggccagagcttcttcggttaa
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