Pseudomonas defluvii: QEP73_21560
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Entry
QEP73_21560 CDS
T10501
Name
(GenBank) SbcC/MukB-like Walker B domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pdeu Pseudomonas defluvii
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_21560
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QEP73_21560
Archaeal homologous recombinant proteins
QEP73_21560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
MMR_HSR1
AAA_22
cobW
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WJM96115
LinkDB
All DBs
Position
4724923..4728570
Genome browser
AA seq
1215 aa
AA seq
DB search
MKILAIRLKNLASLAGPCEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNSIGRETKLPEVDSEILTSDPRTLLRRGTGSGFAEVDFVGIDGHRYRARWETNRARDKA
NGKLQGSRQSLHDLDGNQLLSSQSKSEYKQLIEAKLGLNFEQFTRAVMLAQSEFSAFLKA
DDKDRSELLEKLTNTAIYSQLGRRAYSKSKEAEDIHKALQQQASGITPLSPEARAELDQR
VEQAQRQLKTEQAQLRQFEQQRSWLTELGHLQAQQRAAAEDAHSAQQHWEQLATERLNLE
RLEQLAPQRHQFARQLELTGQRSPLTVAIEQQRQQQVELQAAQQQLEQHLHHAREALSQA
LAQQAQNAPLLRQAFAEQDTLARLEQELADSLALHQQAEQASREGQQQLHTLIEQQQRNS
ERLQQLDEQLAHSTHLSSLGDAWSAYRGQLQQLMLIGNRLNKGREELPALQQRATDAARQ
LEEQRTHLAQIYHEAGAEPEALAEQISLLGTLLQDNRKQQRAVEELTRLWNSQQDLDKQI
HALRERQQAAQQQREQLISEGLQGKQELIAAEQALNLTRQLLERQRLARSASVEELRAQL
QDDQPCPVCGSQEHPYHQPEALLQSLGRHDQDEEANAQRLVDGLKEKLDELRAKLAGVNS
QIKEYLHQHEHLVTQQQALAPSLDAHPLYAQLAHQDSNACSVWLELQLRRLNDDINRDEQ
RQHTLLTLQQDAARLQQQLQVAIEASQQATLHVSQQQQALSDDEERLEQALASFAGLLPA
DILQALRQEPSAAFLQLDQQLAQRLELIGRQKDEQQDYNDRQQQLEKASLQQQARVQKLE
ELQQQVVARKTQQQQAKATLDGLLGEHENAQHWQQQLEQAVEQARSVEAATQQQLQDSRA
RSIELTAELKAKAQQRDALEEECRQLEAVIGQWRHAHPELDDAGLTQLLAFDDEQISQLR
QRLQNARKAIEHTQVLVQEREQRLQQHQAQANGELPADQLEQAMAALQQQLHTREQQCAE
LRAEQADDQRRQQANQALAEQIAQAYTEWQRWARLNALIGSATGDTFRKIAQGYNLDLLV
HHANAQLRQLARRYRLKRGGSLLGLLVQDTEMGDELRSVHSLSGGETFLVSLALALGLAS
MASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQ
VRRQGNGLSTLEVSG
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgccattcgcctgaaaaaccttgcgtccctggccggcccttgcgaaatc
gacttcaccgccgagcccttggccagtgctggcctgtttgcgatcaccggccccaccggc
gcgggcaagagcaccttgcttgatgccttgtgcctggcactgttcggcgctgtaccacgc
ctgaacagcattggccgggaaaccaaactgccagaagtcgacagcgagatccttaccagc
gacccgcgcacgctgctacgccggggcaccggcagcggctttgccgaagttgatttcgtc
ggtatcgacggccaccgttaccgggcacgctgggagaccaaccgcgcccgcgataaagcc
aacggcaagctgcaaggcagccgtcagagcctgcatgacctggacggcaaccagttactg
agcagccagagcaaaagcgagtacaaacagctgatcgaggccaagctggggctcaacttc
gaacagttcacccgtgcggtcatgctggcccaaagcgagttcagcgccttcctcaaggcc
gacgacaaggaccgcagcgaactgctggaaaaactcaccaacacagcgatctacagccag
ttgggccgacgcgcctacagcaagagcaaagaagccgaagatatccacaaggccttgcaa
caacaggccagtggtatcacgccgctcagcccggaggcacgcgccgaactcgaccagcgt
gttgaacaggcacaacgccaactcaagaccgaacaggcgcaactgcgccagttcgagcag
cagcgcagttggctgacagagctaggccacttgcaggcgcaacaacgtgccgccgccgag
gacgcccacagtgcccagcagcactgggagcaactggccacagaacgcttgaacctggag
cggctggagcagttggcgccgcagcgccatcagtttgcccgacaactggagctgaccggc
cagcgctcgccactgaccgttgccattgaacaacagcgccagcaacaggttgagttgcag
gccgcccagcaacaactggaacaacacctgcaccacgcacgcgaggcactgagccaggca
ctggctcagcaggcgcaaaacgcgccgttgctgcgccaggccttcgccgagcaagacacc
ctggcgcgcctggaacaggaactggccgacagccttgccctgcaccaacaggccgagcag
gcctcccgcgagggccagcagcagctacacaccctgatcgaacaacagcagcgtaacagc
gagcgtctgcagcaacttgacgagcaactcgcgcacagcacgcacctgtccagcctgggt
gacgcctggagcgcctaccggggccaactgcagcaactgatgctcattggcaaccggctc
aacaaaggtcgcgaggaactgcccgccctgcagcaacgcgccacggatgcggcccgccaa
ctggaagaacagcgcacacacctggcgcagatctaccacgaagccggcgctgaacccgag
gccctggcagagcagatcagcctgctgggaacgctgctgcaagacaaccgcaagcaacag
cgtgcggtcgaagaactgacccggctctggaacagccagcaggatctggacaaacaaatc
cacgccttgcgtgaacgccagcaggccgcgcagcagcaacgcgaacagttgatcagcgag
gggctgcaaggcaaacaagagctgattgccgccgagcaggcactgaacctcacacgacag
ctgcttgagcgtcagcgtctggcccgcagtgccagcgtcgaagagctccgagcgcagcta
caggacgaccagccctgccccgtctgcggcagccaggaacacccgtaccaccagcccgaa
gcgctgttgcaaagccttggccgacatgaccaggatgaagaagccaacgcccagcgcctg
gtcgacgggctgaaagaaaaactggatgaactgcgagcgaaactggccggcgtcaatagc
cagatcaaggaatacctgcaccagcacgagcaccttgtcactcaacagcaggcgttggcc
cccagcctcgatgctcacccgctctacgcccagttggcccatcaggacagcaacgcctgc
tcggtctggctggagcttcaactgcgccgcctgaacgatgacatcaaccgggacgagcaa
cgccagcacacactgctcacgcttcagcaggacgccgcccgcctgcagcaacaactgcag
gtagccatcgaggccagccagcaggccacgctgcacgtgagccagcaacagcaggcgctg
agtgacgacgaggaacgcctggaacaggcactggcaagcttcgccggcctgctgcccgcc
gacatcctgcaagccctgcgtcaggaaccgtcagccgccttcctgcaactcgaccagcaa
ctggcgcagcgcctggaactgataggccggcaaaaagacgagcaacaggactacaacgac
cgccagcagcaactggaaaaggccagcctgcaacaacaggcacgggtacagaagctggag
gagctgcagcagcaggtcgttgcccggaaaacccaacagcagcaggcaaaagcaacacta
gacggcctgcttggcgagcacgaaaacgcccagcactggcaacagcaactggagcaggcc
gttgaacaggcgcgcagcgtcgaagcggccacccagcagcaactgcaggacagccgcgcc
cgctcgatcgagctgacagccgagctcaaggccaaagcgcaacagcgagatgccctggaa
gaggaatgccgtcaactggaggccgtcatcggccaatggcgacacgcccatcctgaattg
gacgatgccggcctgacgcaattgctggcgttcgatgacgaacagatcagccagttgcgt
cagcgcctgcaaaacgccagaaaagccatcgagcacactcaggtgctggtgcaagagcgc
gaacagcgccttcagcaacatcaggcccaagccaacggggaactgccagccgatcagctg
gaacaagccatggccgcgttgcagcaacagctgcacacccgcgagcaacagtgtgccgaa
ctgcgcgccgagcaagccgacgaccagcgccgccaacaggccaaccaagcgctggcagaa
cagattgcccaggcctataccgagtggcaacgctgggcgcgcctgaacgccctgatcggt
tctgccactggcgataccttccgcaagatcgcccagggctacaacctcgacctgctggtg
caccatgccaacgcacaactgcgtcaattggcccgccgctaccggctcaagcgcggcggc
agcctgttgggcctgctggtgcaggataccgagatgggggatgaactgcgctcggtgcac
tccttgtccgggggcgaaaccttcctggtctcgctggcgctggccctggggctggcgtcg
atggcctcgagcacgttgaagatcgagtcgctgttcatcgacgaaggcttcggcagcctc
gaccccgaatcgctgcaactggccatggacgcactggacggtttgcaggctcaagggcgc
aaggtcgcggtgatctctcatgtgcaggaaatgcacgagcggattccggtacagatccag
gttcgtcgccaaggcaatggcctgagtaccctggaggtcagtggatga
DBGET
integrated database retrieval system
