Pseudomonas defluvii: QEP73_21825
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Entry
QEP73_21825 CDS
T10501
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEP73_21825 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_21825 (uvrB)
DNA repair and recombination proteins [BR:
pdeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEP73_21825 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QEP73_21825 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
SHCBP_N
Motif
Other DBs
NCBI-ProteinID:
WJM96158
LinkDB
All DBs
Position
complement(4783489..4785504)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDVFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPDDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
VEIRPATTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRMTGSMQRAIDETERRREKQVAFNLANGIVPKGVVKDITDIMEGATV
PGSRSKKRKGMAKAAEDSARYEAELRSPAEITKRIKQLEEKMYQLARDLEFEAAAQLRDE
IAALRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtttcaactcgtcacccgtttccagccagctggtgatcagccagaagccatc
cgcctgatggtcgaaggtatcgaggccgggcttgcacatcagaccctgctcggtgtgacc
ggctctggcaagacgttcagcattgccaacgtcatcgctcaggttcagcggccaacattg
gtactggcgccgaacaagacccttgcggcgcagttgtacggcgaattcaaggcgtttttc
ccgaacaacgccgtggagtacttcgtttcgtactacgactactaccagcctgaggcctat
gtaccgtcgtctgacaccttcatcgagaaagatgcgtcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgttgctggagcgacgcgacgcgatcatcgtgaccacc
gtgtcctgcatctacggtctgggcagcccggagacctacctgaaaatggtgctgcacgtg
gaccgtggcgacaagctcgaccagcgggccttgctgcgtcgtctggccgacttgcagtac
acccgcaatgaaatggattttgcccgtgccacctttcgcgtgcgtggcgatgtgatcgat
gtgtttccggccgaatcggacctggaggccatccgcatcgagttgttcgatgacgaagtg
gagaacattgccgcgtttgatcccttgactggcgaagtgattcgcaagctgccgcgcttc
accttttacccgaagagtcactacgtcactccgcgtgaaaccctgctggaggcggtggag
ggcatcaaggaggagctcaaggagcgtctggagtacctgcacaaggcgaacaagctggtc
gaggcgcagcgtcttgagcagcgtacccgtttcgacctggagatgatcctcgagctgggc
tactgcaacggtatcgaaaactactcgcgctacctctcgggacgtcctgccggtgcgccg
ccgccgaccttgtacgactacctgcccgatgacgccttgctggtcatcgacgaatcccac
gtcagtgttcctcaggttggcgccatgtacaaaggcgaccgttcgcgcaaggaaaccctg
gtcgagtacggttttcgcttgccgtcggcgctggataaccgaccgatgcgtttcgatgaa
tgggagagcgtcagcccccagaccatttttgtctcggcaaccccggggccttacgaggcc
gagcatgcggggcgggtggttgagcaagtggtgcggccgacagggctggtcgatccgcag
gtcgagatacgtccggcaaccacgcaggtggacgatctgctttcggagatccgcaagcgt
gtcgcggtcgaggagcgagtgctggtgaccaccctgaccaagcgcatggctgaagacctg
accgactaccttgctgatcatgatgttcgggtgcgttacctgcactcggacatcgacacg
gtcgagcgggtcgagattatccgcgacctgcgccttggaaccttcgatgtcctggtaggc
atcaacctgttgcgcgaaggcctggatatgccggaagtgtcgctggtggccattctcgat
gccgacaaggaaggtttcctgcgttcggaacgctcgctgattcagaccattggccgggct
gcgcggaacctcaatggccgggcgattctctatgccgaccgtatgaccggttcgatgcag
cgcgccatcgatgaaaccgagcgccgtcgggagaagcaggtggcctttaacctggccaat
ggcatcgtgcccaagggcgtggtcaaggacatcaccgatatcatggaaggtgccactgtc
cccggttcgcgcagcaagaaacgcaaaggcatggccaaggcggcagaggacagtgcgcgt
tacgaagccgaactgcgttcaccggccgagatcaccaagcgcatcaagcagctggaagag
aaaatgtaccagttggcccgagacctggaattcgaggcagcggcccaattgcgggacgag
atcgcggccttgcgtgagcgcttgttgacggtctga
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integrated database retrieval system
