Pseudomonas defluvii: QEP73_23940
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Entry
QEP73_23940 CDS
T10501
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QEP73_23940 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdeu03400
]
QEP73_23940 (ung)
Enzymes [BR:
pdeu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QEP73_23940 (ung)
DNA repair and recombination proteins [BR:
pdeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QEP73_23940 (ung)
Prokaryotic type
QEP73_23940 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WJM96543
LinkDB
All DBs
Position
complement(5228352..5229044)
Genome browser
AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKQALRSEFDQPYMQELKDFLRQEHAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGTPTPPSLLNIYKELQRDLNIDIANHGCLQHWA
EQGVLLLNTTMTVERGNAASHANKGWQHFTDRIIEVVSEQQPNLVFLLWGAHAQSKRKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSQTNRFLEQRGLAPIDWRLPPA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacgaccgtatcaaactcgaacccagctggaagcaggccttgcgcagcgag
ttcgaccagccctacatgcaggagctgaaagactttctgcgccaggaacatgctgcaggc
aaagagatctacccgccagggccgatgattttcaatgcgctgaattccacgccgctggat
aaggtcaaagtggtgattcttggccaagacccataccacggccccggtcaggcccatggt
ctgtgtttttcggtgcagccaggtacgcctacaccgccgtcgttgctgaacatttacaaa
gaactgcagcgcgacctgaacatcgacattgccaaccatggctgcctgcagcactgggct
gaacaaggcgtgttgctgctcaataccaccatgactgtcgagcgaggcaatgcggcgtcc
catgccaacaagggctggcagcacttcaccgaccggattattgaagtggtgagtgagcag
cagccaaacctggttttcctgctgtggggcgcgcatgcgcaaagcaaacgcaaattgatt
gatgccaccaagcatctggtcctgacgtcggtgcatccatcgccgttgtcggcttaccgt
ggttttctcggatgtggccatttcagccagaccaatcgcttcctcgagcagcgtggcctg
gcgcctatcgattggcgcctgccgcctgcgtaa
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