Clostridioides difficile 630Derm: CD630DERM_04060
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Entry
CD630DERM_04060 CDS
T03785
Name
(GenBank) putative tRNA (Uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pdf
Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdf03009
]
CD630DERM_04060
Enzymes [BR:
pdf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CD630DERM_04060
Ribosome biogenesis [BR:
pdf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CD630DERM_04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Met_10
N6_N4_Mtase
Methyltrans_SAM
Methyltransf_32
PrmA
Methyltransf_11
UPF0020
PCMT
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
CEJ96924
LinkDB
All DBs
Position
1:484369..485730
Genome browser
AA seq
453 aa
AA seq
DB search
MKKKDVIEFEVDKMEFGGTSLSQVGDRVIHMKGGISGQKVRAGVKKVRSKKAEVKMIELL
ENSPLETEETCKHFRECGGCTLLSVPYEKQLEIKEKQVMDLFLKQDLFGFQFLGIEGSPE
NKYYRNKMEYTFGDEVKNGPLTLGLHKKGKHIDIQTVEECMLVDEDFSKILVSSVEFFNE
KKLPYYRTMNHKGYLRHLVVRKGIHTNEIMVNIVTSSQEDFDMNEFKDMLLGIDLKAELV
GVLHTINDGLADAVQCDELRVLYGRDYIQEEILGLKFKISPFSFFQTNTKGAEVLYSIAR
DFIGDYNDKVVFDLYSGTGSIGQVMAGAAKKVYGIEIVEEAVVAANENAKLNGLTNCEFI
AGDVAKVVKDLKDKPDLIIVDPPRPGIHKDAIRDICGFGAKEIVYISCNPKSLVVDLVDF
KGYGYEIKMVKCMDMFPNTPHVECIALIQRVKS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaaaaagatgttatagaatttgaagtagataaaatggaatttggtggtacatct
ttaagccaagttggagatagagttatccatatgaagggtggaataagtggtcaaaaggtg
agagctggagttaaaaaagttagaagtaagaaagctgaagttaagatgatagaattatta
gagaactcaccacttgaaactgaagaaacttgcaagcactttagagagtgtggaggatgt
acactattgtctgtgccatatgaaaaacaattagaaataaaagaaaaacaagttatggat
ttatttttaaagcaagatttatttggatttcagtttttagggatagaaggaagtccagaa
aacaaatattatagaaataagatggaatatacttttggagatgaagtaaaaaatggacct
ttgacattaggtcttcataaaaaaggaaagcatatagatatacaaactgttgaggagtgt
atgttggttgatgaagacttctcaaagatattagtttctagtgtagagtttttcaatgaa
aaaaagcttccttattatagaacaatgaatcacaaaggatatttgagacatcttgtagtt
agaaaagggattcacactaatgagattatggttaatatagtaacttcttctcaagaagat
tttgatatgaatgagtttaaagatatgcttttagggattgatttaaaagctgagttagta
ggtgtacttcatactattaatgatggtttagcagatgcagtccaatgtgatgagttaaga
gtattgtatggaagagattatatacaagaagaaattttaggtcttaagtttaagatctca
ccattttcgtttttccaaaccaatactaagggagctgaggttctttatagtattgctagg
gattttattggagattacaatgataaagttgtatttgacttgtatagtggtactgggtct
attggacaggttatggctggtgctgctaagaaagtgtatggtattgagatagttgaggaa
gctgttgttgctgctaatgagaacgctaagttgaatggacttactaattgtgagtttatt
gctggggatgtggctaaggttgttaaggatttaaaggacaagcctgatttgattattgtt
gaccctcctagaccaggcattcataaggatgctattagggatatttgtggatttggtgct
aaggagattgtttatatttcttgtaatcctaagtctttggttgttgatttggttgatttt
aaggggtatggttatgagattaagatggttaagtgtatggatatgttcccaaatacgcca
catgtggagtgcatagcgttgatacaaagagtgaaatcgtga
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