Clostridioides difficile 630Derm: CD630DERM_07620
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Entry
CD630DERM_07620 CDS
T03785
Symbol
srlR
Name
(GenBank) Transcription antiterminator, PTS operonregulator
KO
K03491
probable licABCH operon transcriptional regulator
Organism
pdf
Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdf03000
]
CD630DERM_07620 (srlR)
Transcription factors [BR:
pdf03000
]
Prokaryotic type
Other transcription factors
BglG family
CD630DERM_07620 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRD
PTS_EIIA_2
Mga
HTH_11
HTH_Mga
PTS_IIB
HTH_DeoR
HTH_29
HTH_7
SpoIIID
HTH_17
MerR
Motif
Other DBs
NCBI-ProteinID:
CEJ97309
LinkDB
All DBs
Position
1:939901..941886
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AA seq
661 aa
AA seq
DB search
MSMTYMDPRVFLILEMVLEEDTNTLEQFSNVLGVSTRTIRNYINQINRELKGGIAKIVKN
EKGTYSIRIEDESKLIEIVNFNRGKLSNFINLNSPDERINYVLDILTMTNNPITIDDLAE
EICIGRTTLIKDLKKADRILAEYDLELKRKPNIGMILVGEEMDIRLLILDRLYENYIDVL
ENVNQINLVKDYDIEYLRDELKKLFKKEELYITEQVLRDVERYIIMSVLRNLNGYKFEKI
DKRFEVIRCSDEYTLGLKLKALLEKIFNIVLNEKETIFLTMPLIGRKAPSTKLALSSIKI
NDSVKEVVDEVTSFLLETSGIDFKEDKKLIENLEYHLYFALNRMRFNIRVKNPLLQEIKE
RYTFPYSVAKIAAMIIEEKFDLKICDHEIGYIALHFGSYFEKNSRKVLNVNRVAVVCGTG
LGTAQLIRIKIGKILGESVEVNTFSDIEAKANLDLLKYYDLVFTTVDFKTDLDVPIFRVN
ALFNEESIKKEIENAILLKNSINLKSIKKIEKNIPFIGKLIEEDKFFILNKSTFMENLED
MLEKLVHKGIIDIEFKKKVLKREKKSSTALDNYIALPHSVNTNGENLYLAFGILEKPVIW
DTKEIRIIILMIIPDKNVDSTDLIIKSYEEVLEVGRDKKMVEELAKVKSFDEFYKIITKR
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgacttatatggaccctagggtttttttgattttagaaatggtgttagaagaa
gacacaaatactctagaacaattttcaaatgttttgggtgttagtactaggactatcaga
aactatataaaccagattaatcgagaattaaaaggtggtattgctaaaatagttaaaaat
gaaaaaggtacatatagtataagaattgaggatgaaagtaaattaattgagattgtaaat
tttaatagaggaaagctatcaaattttataaatttaaattcacctgatgaaagaataaat
tatgttcttgatattttaactatgaccaacaatccaattaccatagatgatttggctgaa
gagatatgtataggaagaacaacattaataaaggatttaaaaaaagcagacagaatttta
gctgaatatgatttagaattaaaaaggaagccaaatataggtatgattttagttggtgaa
gaaatggatataagattattaatccttgatagattgtatgaaaattatattgatgtcttg
gaaaacgttaatcagataaatttagttaaagattatgatattgaatatcttagagatgaa
ttaaaaaagttatttaaaaaagaagaactctacataacagaacaggtcttgagagatgtt
gaaagatatataatcatgtctgtcttaagaaatctaaatgggtacaaatttgaaaagata
gataagagatttgaagtgataagatgttcagatgaatatactttaggattaaagctcaaa
gctttattggaaaagatatttaatatagttttaaatgaaaaagaaaccatatttttgaca
atgccattaataggtagaaaagctcctagtacaaaattagcacttagcagtataaagata
aatgatagcgtaaaggaagttgtagatgaagtaactagttttttattagagacctcaggg
attgattttaaagaagataaaaagcttatagaaaatttggaatatcacttgtattttgca
cttaatagaatgagattcaacataagggtaaaaaatcctcttttacaagaaataaaggaa
agatatacatttccatatagcgttgcaaagatagctgcaatgataattgaggaaaagttt
gacttgaaaatatgtgaccacgaaataggatatatagcattacattttggaagttatttt
gaaaaaaattcaagaaaagttctaaatgtaaatagggtagctgttgtttgtggaacaggt
cttgggactgcacaacttattagaataaagataggaaaaatacttggagaaagtgtagaa
gtaaatactttttctgatatagaagctaaagctaatttagatttattaaagtattatgat
ttagtatttacaacagtagatttcaaaacagacttagatgttccaatttttagagtaaat
gcgttatttaatgaagaaagtataaagaaagagatagaaaatgcaatacttttgaaaaat
agtataaatcttaagtctataaaaaagattgaaaaaaatatcccttttataggtaaatta
attgaagaggataagttctttatattgaataagagtacgtttatggaaaatttagaagat
atgttagaaaaattagttcataaaggaattattgatatagagttcaaaaaaaaggtatta
aaaagagaaaagaaatcttcaacagcattagataattatatagcattgcctcactcagtt
aatactaatggggaaaatctttatctggcatttggaatattagaaaaaccagtgatttgg
gatacaaaggaaattagaataataatattgatgataattccagataagaatgtagatagt
acagacctgataataaaaagttatgaagaagtacttgaagtagggagagataaaaagatg
gtagaagaacttgctaaggtaaaatcatttgatgaattttataaaataattaccaagagg
aggtaa
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