Clostridioides difficile 630Derm: CD630DERM_09010
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Entry
CD630DERM_09010 CDS
T03785
Symbol
opuCC
Name
(GenBank) ABC-type transport system, glycinebetaine/carnitine/choline permease
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD630DERM_09010 (opuCC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdf02000
]
CD630DERM_09010 (opuCC)
Transporters [BR:
pdf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
CD630DERM_09010 (opuCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CEJ97448
LinkDB
All DBs
Position
1:1089768..1091321
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AA seq
517 aa
AA seq
DB search
MFLANFFNFILLQKDKIIELLIQHMSLTVTSILIAIIVGVPLGIIISRISSLRKFVLGFV
NLVQAVPSMALLGLLVPILGIGSKPAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGI
GLTRNQTLFKIQFPLALPIIMGGVRISAVTAVGLMTLAAFIGAGGLGYLVFSGVQTVNNN
MILAGAIPSCIIALLVDYLFSKIEVAVTPKGLNPKAPKKNYIALKVISVVLVVSMLFVVF
SSSFSSKKDTITIGSKDYTEQLILGNVYAELVEKNTNLKVKKNLNLGGSSVAFNAIKSGE
LDMYVDYTGTLLVNVMRHAPIKDADEAYNVVKDTMEKENQLTLLDPLGFNNTYTLAMMPE
TAEKYGINTISDLTKYGKEFTFSPTLEFENREDGLVGLSRDYGLKFKDVKAMNGSLRYTA
LDNNESQVIDAFLTDGLIKKFNLKILEDDKNFFVPYYAAPLVREDTLKKYPELEKVMNML
SGKVNEETMRELNYQVDELGKSPEEVAHSFLVKEGLV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgttcttggctaatttttttaactttatactattacaaaaagataagattatagagctt
ttaatacaacatatgagtctaactgttacatctattttaatagctataatagttggtgtt
cctcttggaataattatttcaagaatctcatctcttagaaagtttgtacttggatttgta
aacttagtccaagcagttccgtctatggcacttttgggtcttcttgtacctatacttggt
ataggaagtaaaccagccatatttatggtagtggtttattcattactaccaattgtaaaa
aatacgtatataggtataacaagtattgacccagtagtattagaatcagctaaaggtatt
ggtcttacaagaaatcagacattatttaaaatacaatttcctttagcgcttcctataata
atgggtggagttagaatatctgcagttacagctgttggtttgatgactcttgcagcattt
ataggtgctggtggtttaggatatttagtattttcaggggttcaaactgtaaataataat
atgattttagcaggggcaatcccatcatgtataattgcactgttagttgattatttattt
agtaaaattgaagttgcagttactccaaaaggattaaatccaaaagcacctaagaagaat
tatatagcacttaaagtaatatctgtagtgcttgttgtttcaatgttgttcgttgttttt
agttctagtttttcaagtaaaaaagatacaataactattggttctaaagattatacagaa
caacttatacttggcaatgtttatgctgaattagtagaaaaaaatacgaatcttaaagtt
aagaagaatttaaatctaggtggttcatctgttgcatttaatgcaattaaatctggtgag
ttagacatgtatgttgactatacaggtacacttttggtaaatgtaatgagacatgctccg
attaaagatgctgatgaagcatataatgttgtaaaagatactatggaaaaagaaaatcag
ttaactttacttgaccctcttggatttaataatacttacacattagccatgatgcctgaa
actgctgaaaagtatggaataaatactatttctgatttgactaaatatggtaaagaattt
acattctcaccaactttggagtttgaaaatagagaagatggtcttgtaggactttctaga
gattatggtttaaaattcaaagatgtaaaagcaatgaatggaagtttaagatatacagct
ttagataataatgaatctcaggttatagatgcatttttaactgatggtcttattaaaaag
tttaatcttaagatattagaggatgataaaaacttctttgtaccatattatgcagcacca
ttagtgagagaagatactttgaagaaatatcctgagttagaaaaagttatgaatatgctt
tcaggaaaagtaaatgaagaaactatgagagaacttaactatcaagtggatgaacttggt
aaatcaccagaagaagttgctcattcattcttagttaaagaaggcttagtataa
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