Clostridioides difficile 630Derm: CD630DERM_10180
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Entry
CD630DERM_10180 CDS
T03785
Name
(GenBank) ABC-type transport system, multidrug-familyATP-binding protein/permease
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD630DERM_10180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdf02000
]
CD630DERM_10180
Transporters [BR:
pdf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CD630DERM_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
ABC_membrane_3
AAA_21
RsgA_GTPase
EI24
SMC_N
AAA_16
AAA
NTPase_1
AAA_30
AAA_14
MMR_HSR1
AAA_23
TsaE
AAA_29
AAA_28
AAA_18
DUF6750
DUF87
ABC_membrane_2
cobW
DUF6659
MobB
DO-GTPase2
ATP_bind_1
AAA_5
nSTAND3
AAA_24
DUF6594
Motif
Other DBs
NCBI-ProteinID:
CEJ97576
LinkDB
All DBs
Position
1:1193312..1195174
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AA seq
620 aa
AA seq
DB search
MSEKRIDEQDIEVLSFEDDMSAEKAKDAKKTTKRLLKYMAKQKFKILIIFISVLISSALT
VLAPMVMGKAIDQLFNGIKTAVQTGTKFSVNFSTMGGIVSILLGLYLISAVFIYIQQYIM
SGVAQNLVLSMRKDLSDKLNKLPLKYYDSHKKGETLSIVTNDLEKVADSLQEGLMQLITA
VVTVVGSIVMMISISVPLTIVSAITLLVSLGITVVIARKSQERFSENQKALGELNSNIEE
IFTGQIVVKAFSKEKDTIRNFKILNQNLYNASRKAQFSSYAISPIIRFINLIGYVIIAVV
GGIFASTGAMTLGSIQAFIQYVNQASEPTTEISYIVNMLQAAIASAERVFTVMDEVEEIK
DEESSKVISMPKGKVQFEHVKFGYSDDFILMKDININLNAGDKIAIVGPTGAGKTTLVNL
LMRFYEIQGGRITIDGVNIKDLKRGELRTMFGMVLQDTWLFNGSIKENIAYSKSDATMDE
IVRAAKSARVDHFIRTLPQGYDTILTEDSSNLSQGQKQLLTIARAILSDPSVLILDEATS
SVDTRTEVEIQKAMNNLMKGRTSFVIAHRLSTIRDADLILVMKEGTIIEQGSHKELIEKK
GFYEELYNSQFTSEYDEDVV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaaagaatagatgaacaagatatagaagtacttagttttgaagatgacatg
tcagcagaaaaagctaaggatgcaaaaaaaactactaagagattattaaaatatatggca
aaacaaaagtttaaaatattaattatttttatttcagtattgataagttcagcgcttaca
gttttagcacctatggttatgggaaaagctattgaccaactatttaatggaataaaaact
gcagtccaaacaggtacaaaattcagtgtgaattttagtactatgggagggatagtatca
atacttctagggttgtacttaattagtgcagtatttatatatattcaacagtatattatg
tcaggagttgcacaaaatctagttcttagcatgagaaaagatttaagtgataaactcaat
aaacttcctcttaagtactatgattctcataaaaagggggaaacacttagtatagtaaca
aatgatttagaaaaagtagcagatagtttacaagaaggattaatgcaacttattacagca
gtagttacagtagttggttctattgtaatgatgataagtataagtgtaccacttacaata
gtatcagctataacattacttgtttcattgggtattactgttgtaattgcaagaaaatca
caagaaagattctctgaaaatcaaaaggcactaggagagttaaatagcaatatagaagag
atatttactggtcaaatagtggttaaagcatttagtaaagaaaaggatactataagaaac
tttaaaatattaaatcaaaatctttataatgcaagtagaaaagcacagttttcgtcatat
gcaatatctccaattattagatttataaacctaattggctatgttattatagcagttgta
ggtgggatatttgcatcaactggagcaatgactcttggtagtatacaagcgtttattcaa
tatgtaaatcaagcatcagagcctactacagaaatatcttatattgtaaatatgcttcaa
gcagcaatagcatctgcagagagagtttttacagttatggacgaggtggaagagataaag
gatgaagaatcttcaaaggttattagcatgcctaaaggtaaagtacaatttgagcatgtt
aaatttggatatagtgatgattttattcttatgaaagatattaatatcaatctaaatgca
ggagataagattgcaattgttggacctacaggagctggaaagacaactcttgtaaattta
cttatgagattttatgagatacaaggtggaagaattactattgatggtgttaatataaaa
gatttaaagcgtggagaacttagaactatgtttggtatggttcttcaagatacatggctg
tttaatggaagtataaaagaaaatattgcatatagtaagtcagatgccacaatggatgaa
attgtaagagcagcaaaatcagcaagagtagaccattttataaggactttaccacaaggg
tatgacactatattgactgaggattcttctaatctatctcaaggtcaaaagcaacttcta
acaattgccagggcaatactttcagacccatcagtattgattcttgatgaagcaacatct
agtgtagatactagaacagaggtagaaattcaaaaggcaatgaataacttgatgaaggga
agaactagttttgttattgcacatagattatcaactattcgagatgctgatttaatatta
gtaatgaaagaaggaactattattgaacaaggaagccataaggaacttattgaaaagaaa
ggattctatgaagaactttataacagtcaatttacaagtgaatatgatgaagatgttgta
tga
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