Clostridioides difficile 630Derm: CD630DERM_11480
Help
Entry
CD630DERM_11480 CDS
T03785
Name
(GenBank) putative penicillin-binding protein with aN-terminal TonB-box
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf00550
Peptidoglycan biosynthesis
pdf01100
Metabolic pathways
pdf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CD630DERM_11480
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CD630DERM_11480
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdf01011
]
CD630DERM_11480
Enzymes [BR:
pdf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CD630DERM_11480
Peptidoglycan biosynthesis and degradation proteins [BR:
pdf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CD630DERM_11480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
ARM_TT21_5th
TMPIT
Motif
Other DBs
NCBI-ProteinID:
CEJ97718
LinkDB
All DBs
Position
1:1350881..1353859
Genome browser
AA seq
992 aa
AA seq
DB search
MEENKQVDRLKIIKIVMGVIFLAILVKIIYMTTFKYEYYNELAENKTYKKLAIEAPRGEI
KDRYGRLLAGNKNLFTVQVSGNDINKKDANKHSRANEISLKLINLLERNGEEYVDEFPIY
VENGKYYYTYDRDIREYKSENGIPNDYNAKESFYYLVDKLISAGILSQEDKRLDATRLQA
KLNENGYYPPILVSKWMFTAERDKRDWLASYKIKETKLSAKEAFEKVRNSDALEIDKSLS
DEDARKIMVVRDLIKSKGYSQYNPVTIAKDVGETTIAQIEESAMDLVGVSIAVEPVRYYP
NGSLASHMLGYVGKMPSTQIESYLQKGYETGDMVGLAGVEKSNESRLRGTDGYKMVKVDA
LGRISKEIESKKPKSGDTVYLTLDKDLQEVSDNALKQIIEVASKGGTFKSKFGDKPISAY
AGKAQSAALIAIDVKNGEVLASSSYPNYDPNKFAKGISTEDYKALQPKNPNDLLAGSPLL
NLVTQGEFQPGSSFKMVTSMAALENGLDPNFTINDPGVIMLGKKSFGDYVWNHGRGKHGM
TNLYKAIQESCNIYMATIGTGKTWPDGKSIGIDMNANKILEYAKLFGLDQNTGLQDEVEE
RAGKVPSTEDKLKSTQALLKSNLEREMANDFVDITREKNPKEYEKRINEIVSWAAEKKTP
GRVETMNRLKKLDVKEDRIEEVADLAVFSYFNFAKWSTADTFNLAIGQGENAYTPAQISR
YVAAIANGGNLVELSVVDRAVSSDYSSVKINDQKKVEKIPFKNPDNLKELTKGMKLVARQ
GTAKSAFADFPIDVAAKTGTAEKSGKIPTDNEYEYLKSHMSSYNVNLNDAIKLADKMKAE
KEKELSLAKEKEIKKKLENKDLKDEERKKLEEELEDGVKVRLEDTDKVNSSYLRKAIKEL
NPKITDDQIDRFKQDYGSFTWTVAFAPADDPEIAVVCVIPQGDSSVFSLLPTREVIGTYM
GLEPTNSKNDNKTNDVNNSSDENINFESQINR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaataaacaagttgatagactaaaaataattaagatagtcatgggcgtgata
tttttagctattttagtaaaaataatctatatgactacatttaaatatgaatattacaat
gagttagctgagaataaaacatataaaaagttggcaatagaagctccaagaggagaaata
aaagatagatatggaagactgttggcaggaaataaaaacttatttactgttcaagtttca
ggtaacgatattaataagaaagatgcaaataagcattcaagagcaaatgaaatatcatta
aaacttataaatttgctggagagaaatggtgaagaatatgtagatgagtttcctatatat
gtagaaaatggaaagtactattatacatatgacagagatattagggaatataaatcagaa
aatggtattccaaatgattataatgctaaggaaagtttttattacttggtggacaaactt
atatcagctggaatattatctcaagaagataaaagattggatgcgacaagattacaggca
aaactaaatgaaaatggatattatccacctattttagttagtaaatggatgttcacagca
gaaagagataagagagattggttggctagttataagataaaagaaactaaactgagtgcc
aaagaagcgtttgaaaaagtaagaaatagtgatgcattagaaattgataaaagtttgagt
gatgaagatgcaagaaaaataatggtcgtaagggatttgataaaatcaaaaggatattct
caatataatccagtaactattgctaaggatgtgggagaaactacgattgctcaaattgaa
gaaagtgctatggaccttgttggtgtttcaatagcagtagaaccagtaagatattatcct
aatgggtcattagcttctcatatgttaggatatgtaggaaaaatgccatccactcaaata
gaatcataccttcaaaaaggttatgaaactggagatatggtaggtcttgcaggagtagaa
aagagtaatgaaagtagattaagaggaactgatggttataaaatggttaaagttgatgca
ttgggtagaatcagtaaagaaattgaatctaaaaaacctaaatcaggagatactgtgtat
cttacactagataaagatttacaagaagtttcagataatgcattaaaacagataatcgaa
gttgcttctaaaggaggtacttttaaaagtaaatttggggacaaaccaattagtgcatat
gcaggaaaagcacagtcagcagctcttatagctattgatgttaaaaatggagaagtatta
gcttcatcaagttatcctaattatgacccaaataaatttgcaaaaggtatttctacagag
gattataaagcacttcaaccaaaaaatccaaatgacttactagcaggaagtccactttta
aacttggttacacaaggggaatttcagccaggttcttcatttaagatggtaacttcaatg
gcagcgttagaaaatggtctggatccaaactttactataaatgaccctggggttataatg
ttaggtaaaaaatcttttggtgactatgtatggaaccatggtagaggaaaacatggtatg
acaaacttatataaagcaatacaagagtcttgtaatatatatatggcaacaattggtaca
ggtaaaacatggccagatggaaaaagcattggtatagatatgaatgcaaataaaatactt
gagtatgcaaaattatttgggcttgaccaaaatacagggcttcaagatgaagtagaagaa
agagcaggtaaagttcctagcacagaagataaattgaaatcaacacaagctcttctaaag
tcaaatttagaaagagaaatggcaaatgattttgttgatataactagagaaaaaaatcct
aaagaatatgagaaaagaatcaatgagattgtaagctgggcagcagaaaagaaaactcct
ggtagagttgaaacaatgaataggctaaaaaaattggatgttaaagaagatagaattgaa
gaagtagcagatttagcagtatttagttattttaattttgcaaaatggagtactgcagat
acattcaacttagctataggacaaggtgaaaatgcttatacaccagctcaaatatcaaga
tatgtagctgctatagcaaatggaggtaatttagtagaattatctgtagttgatagagct
gtttcaagtgattattcatcagttaaaattaatgaccagaagaaagtcgaaaaaatacct
tttaaaaatccagataacttaaaagaattaacaaaaggtatgaaattggttgcaagacaa
ggtacagcgaagagtgcttttgctgattttccaatagatgtagcagcaaaaactggtaca
gctgagaaaagtgggaaaatacctacagataacgagtatgaatatttaaaaagtcatatg
tcatcttataatgtcaacctaaatgatgcgattaaactagctgataagatgaaagcagaa
aaagaaaaagagctttcattagctaaggaaaaggaaataaaaaagaaattagaaaataaa
gatttgaaagacgaagaaagaaagaaattagaggaagaattagaagatggagtaaaagtt
agattagaggacactgataaggtgaattcttcatatctaagaaaagctataaaagaatta
aatccaaaaataacagatgaccaaatagatagatttaaacaagattatggttcttttacg
tggactgttgcttttgctccagcagatgacccagaaatagctgttgtatgtgtaattcct
caaggtgattcaagtgtattctcacttttaccaactagagaagttattggaacttatatg
ggattagagccaactaatagtaaaaatgacaacaagacgaatgatgttaacaattcttct
gacgaaaatataaatttcgagtcacaaattaatagatag
DBGET
integrated database retrieval system
