Clostridioides difficile 630Derm: CD630DERM_13260
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Entry
CD630DERM_13260 CDS
T03785
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdf
Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdf03009
]
CD630DERM_13260 (rimO)
Enzymes [BR:
pdf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CD630DERM_13260 (rimO)
Ribosome biogenesis [BR:
pdf03009
]
Prokaryotic type
ribosomal protein modification factors
CD630DERM_13260 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
PilO
CLP1_P
NAGidase
NELF-A_N
DUF3221
Motif
Other DBs
NCBI-ProteinID:
CEJ97907
LinkDB
All DBs
Position
1:1543056..1544390
Genome browser
AA seq
444 aa
AA seq
DB search
MLKIALESLGCSKNLVDAEIMMGILNNKGYKLIGDFEEADVIIVNTCGFIESAKQESIDT
IINFAELKKTGNLKLLIVTGCLAQRYSEELKTEIPEIDAIVGTGSYQNIDKILKELSEIH
QIVSLNDIEFVFNEDLPRYISTPSYMAYLKIGEGCSNNCTYCIIPKLRGKYRSRKFEDII
KEAKKLAESGVKELVVIAQDTTKYGFDLYGKERLSELLEELAKIDGFKWIRVMYSYPESI
TEELIQVIKKYDNICSYFDMPIQHASNNILKLMNRKTTKEDILNKINLIRSNIPDAILRT
TIIVGFPGETEDDFKQLVDFVEEVKFDRLGAFAYSREEDTPADRLPNHIDEEVKIQRRDT
LMMIQQKISEELNDKKIGKTYEVLIEEQIEDNVYTGRTQGDAEEIDSIVYVKSVDNLEVG
EFVSVQINDAMEYDLMGDVLYELA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatagcattggaatcattaggatgctcaaaaaatttagtagatgcagaaata
atgatgggaattttaaataacaaaggctataaattaattggagattttgaagaagctgat
gtaattatagtaaatacatgtgggtttatagagtcagctaaacaagaatctatagatacg
ataataaactttgcagagttaaaaaaaactggcaatttaaagttgttgatagtaacaggg
tgtctagcccaaagatattctgaagaattaaaaactgaaattcctgaaatagatgctata
gtaggaacaggaagctatcaaaatatagataaaatacttaaagaattaagtgaaatacat
caaattgtaagccttaatgatatagagtttgtatttaatgaagatttaccaagatatata
tctacacctagctatatggcctatttaaaaattggagaaggatgttccaataattgtact
tattgtataataccaaaactaagaggtaaatatagaagtagaaaatttgaagatataatt
aaagaagctaagaaattagctgaatctggagtaaaagaacttgtggttatagcacaggat
acgacaaagtatggttttgatttatatggaaaagaaagattatcagaacttttagaagaa
cttgcaaaaatagatggatttaagtggataagggttatgtattcatatccagaatctata
acagaggaattgatacaagttataaagaaatatgataatatatgtagttactttgatatg
ccaatacagcatgcaagtaacaatattttaaaattaatgaatagaaaaactactaaagaa
gatatattaaataaaatcaatctgataagaagtaatataccagatgctatacttagaact
acaataatagtagggtttcctggtgaaacagaagatgacttcaaacaacttgtggacttt
gttgaagaggttaaatttgatagacttggtgcatttgcatattcaagagaagaagataca
ccagcagatagattgccaaaccatatagatgaagaagtaaaaatacaaagaagagatact
ttaatgatgattcaacaaaaaatatctgaagaacttaatgacaaaaagataggaaaaact
tatgaggtgttaatagaagaacagatagaagataatgtatatacaggaagaacacaaggt
gatgcggaagaaattgacagtatagtgtatgtaaaaagtgtagacaatcttgaagtagga
gaatttgtaagtgttcaaataaatgatgcaatggaatacgatttaatgggagatgtttta
tatgaacttgcctaa
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