Clostridioides difficile 630Derm: CD630DERM_17010
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Entry
CD630DERM_17010 CDS
T03785
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD630DERM_17010 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdf03019
]
CD630DERM_17010 (recQ)
03400 DNA repair and recombination proteins [BR:
pdf03400
]
CD630DERM_17010 (recQ)
Enzymes [BR:
pdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD630DERM_17010 (recQ)
Messenger RNA biogenesis [BR:
pdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CD630DERM_17010 (recQ)
DNA repair and recombination proteins [BR:
pdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CD630DERM_17010 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Utp25_C
HTH_29
FtsH_ext
Motif
Other DBs
NCBI-ProteinID:
CEJ98299
UniProt:
A0A381I9N9
LinkDB
All DBs
Position
1:1978840..1981323
Genome browser
AA seq
827 aa
AA seq
DB search
MNKKLLEILSKYYGYTSFRKGQESIINSILSEKDVLAIMPTGGGKSICYQIPALILDGMT
IVISPLISLMKDQVDALKTMGISAAFINSSLSSKEFNEILNNIRKNNYKILYIAPERLDA
QEFIELINNNNVSQVAIDEAHCVSQWGHDFRLSYRRISDFIKNLPKRPIVTAFTATASEE
VRTDIINLLYLENPDYYITGFDRENLSINIVKSSSKNKYILDYIQNHKNESGIIYVATRK
EVENISNGLSKRNISVSKYHAGLSKNERSKNQEDFINDNVDIMVATNAFGMGIDKPNIRW
VIHYNMPQSIENYYQEIGRAGRDGEKSECVLLFSPGDVHIQKYLIDIGVENPERKLFQHK
KLQYMIDLVYSNSCYRKTILSYFGENYIDNCNNCSNCLVEGEIVDKTIDAQKVISCVARM
KRSYGVTTIVDVLRGSKNKKILQLGLNTLSTYNIMRDYSSEDLKNFVNTLVSHGFLDLVE
TLGNGNRGSFPTIRLNEMSMKVLKGEVKVEFKEIVMTKSLEVEDELYNALRELRHSIASE
ERIAPYMVFGDGTLRAMSSSYPINKEEMLDISGVGEIKYQKYGRDFEAVIKEYVEKNNIN
KKIDEKNVDSKNVNSDFLEVNTDKVLYEKLLVIREEYATKEKLPAYMILANKALKEISGR
YPLDEEQLKDISGIGGVKFEKYGASILAEVNKYVKENNINVIWEKKGKRKLILDGESRKN
NEIALDLLNQGKDIQSISQEIEVSLSTIIGYVHDYVKDGHSISFELGLENFYNEDKKKMI
LEVCEKVGYDNLNNIKRKLPDSIKYENIRAVILDSYLENLKNNIIAE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaacttttagaaatactatcaaaatactatggatatacaagttttagaaaa
ggtcaggaatctataataaattctatcttaagcgaaaaagatgtgttagctattatgcca
acaggagggggaaaatcaatatgttatcaaattccagctttgattttagatggaatgaca
atagtaatttctccacttatatcacttatgaaagaccaagtagatgccttaaagactatg
ggaattagtgctgcttttataaatagttcattaagtagcaaagaatttaatgaaatatta
aataatattagaaaaaataattataaaatactctatattgctccagagagattagatgca
caagagtttattgagctaataaataataacaatgtaagtcaagttgcgatagatgaagca
cattgtgtatctcaatgggggcatgattttaggttgagttatagaaggatttctgatttt
ataaaaaatttgcctaaaagacccatagttacagcatttactgcaacagcttcagaagag
gtaagaactgatataataaatttactgtatttagaaaatccagattattatataactgga
tttgatagagagaatttatcaataaatatagtaaaatcatctagtaaaaataagtatatt
ttagattatattcaaaatcataaaaatgagtctggaattatatatgttgcaactagaaag
gaagttgaaaatatatctaatggtttatctaagagaaatatatctgtatcaaaatatcat
gcaggtttatctaaaaatgaaagaagtaaaaatcaagaagattttataaatgataatgtg
gatataatggtagcaacaaatgcatttggaatgggtattgataaacctaatataagatgg
gttatacattacaatatgcctcaaagtatagaaaactactatcaagaaataggtagagct
ggtagggatggagaaaaaagtgagtgtgtacttttattttctccaggagatgtacatata
caaaaatatttaattgatattggagttgaaaatcctgaaagaaaattatttcagcataag
aagcttcaatacatgattgacttagtttacagtaattcatgctatagaaagacaatattg
agttattttggagaaaattatatagacaattgcaataattgtagcaattgtttagtagag
ggtgaaatagtagataaaactatagatgcacaaaaagtcatttcatgtgtagctagaatg
aaaagaagttatggtgttactactattgtagatgtgcttagaggttctaagaataaaaag
attttacagcttggattaaatactttgtctacatataacattatgagagattattctagt
gaagacttaaagaattttgtaaatacattggtttctcatggttttttagatttagttgag
actctaggcaatggaaatagaggtagttttcctactataagattaaatgagatgtctatg
aaagttttaaaaggtgaagtgaaagtagagtttaaagaaattgttatgacaaaatcattg
gaagtagaggatgagttatataatgctttaagagaacttagacattcaattgcaagtgaa
gaaaggatagctccatatatggtatttggagatggtacacttagagccatgtctagtagt
tatccaattaataaagaagaaatgctagatatctctggagtaggagaaattaaatatcaa
aaatatggtagagattttgaagcagtaattaaagaatatgtcgaaaaaaataatataaat
aaaaaaatagatgaaaaaaatgtcgattcaaagaacgttaatagtgatttcttagaggtt
aatacagataaagttttatatgaaaaactgttagtcattagagaagaatatgcaacaaag
gaaaaattacctgcatatatgattttagccaataaggctttgaaagaaataagtggaaga
tatccacttgatgaagaacaattaaaagatatttctggcataggtggagtaaaatttgaa
aaatatggagctagtattttggcagaggttaataaatatgtaaaagaaaataatattaat
gttatttgggagaaaaagggcaaaaggaagttaatattagatggagaaagtagaaaaaat
aatgaaatagcattagatttgctaaatcaaggaaaagatatacaaagtatcagtcaagaa
atagaagtttcactgtcaaccattattggatatgtgcatgactatgtaaaggatggacat
agtatatcatttgaattaggactagaaaatttttataatgaagataaaaagaagatgatt
ttagaagtttgcgaaaaagttggctatgataatttaaataacataaaaagaaaacttcca
gattcaataaagtatgaaaatataagagctgtgatacttgactcttatcttgaaaactta
aaaaataatattatagcagagtaa
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