Clostridioides difficile 630Derm: CD630DERM_20530
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Entry
CD630DERM_20530 CDS
T03785
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf00300
Lysine biosynthesis
pdf00470
D-Amino acid metabolism
pdf01100
Metabolic pathways
pdf01110
Biosynthesis of secondary metabolites
pdf01120
Microbial metabolism in diverse environments
pdf01230
Biosynthesis of amino acids
Module
pdf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD630DERM_20530 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD630DERM_20530 (lysA)
Enzymes [BR:
pdf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CD630DERM_20530 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF2101
Ribosomal_L12_N
Motif
Other DBs
NCBI-ProteinID:
CEJ98647
UniProt:
A0A381IB07
LinkDB
All DBs
Position
1:complement(2323708..2325000)
Genome browser
AA seq
430 aa
AA seq
DB search
MKLHGTMTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIEYFKAREGKNKV
AYAGKAFLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKKEINMGL
DLGVGKFVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFAL
VNGDLFRAIEKLSEYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLT
EIDLGGGVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGS
TLYTVGSIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHEAMNHVTIAGKCC
ESGDILIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQ
SYEDLLALEI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcatggaactatgactgtaaataatgatgaattatatattggaggagtgagt
tgtttagaacttagtaaaaaatatcaaactccactttatgtatttgatgaagctttagtt
agacaaaattgtagagaatatatagaatattttaaggctagagagggaaaaaataaagtt
gcttatgcagggaaagcttttttacctctttacatgtgtaatcttataaatgaagaacaa
atgtgtttagatgtagtttcaggaggcgagttatatacagcttataaatcaaattttcct
atggaaaaagttttctttcatggaaacaataagactaaaaaagaaataaacatgggatta
gatttaggtgtaggtaaatttgtagtggataatttttatgaattagatttgcttgaagca
ttatgtgaagataaaggtaaaactcaagagatatactttagaataactcctggtatagaa
gctcatacacatgattatataaaaactggacagatagattctaaatttggatttgcttta
gtaaatggagatttatttagagcaatagaaaaattaagtgaatataaaaatattaaactt
gtaggtcttcacgctcatataggttcacaaatatttgatgtagaaccatacatagataca
gtggatataatgatgaacttggtaaaagaaataaaagaaaaattcaacatacaactaaca
gaaattgacctaggtggaggagttggcgtttattatagcgaaggagataaacctaaaact
ataaaagagttttgtgaaaccataatcactaaagcagaaacttcgtgtaaagagcttgga
atagaagtacctacattggtaatagaaccaggaaggtcaatagttgcaaatgcaggaagt
acattgtatacagtaggttctataaaagatataaaagatgttagggtttatgtaagtgta
gatggaggtatgacagataatgtaagaccttcgttgtaccaagctagttatgagtgtagt
attgtgaataaaattaatcatgaggctatgaatcatgtaacaatagctggaaaatgttgt
gagagtggagatatattaattggagatataaacataatggatattaaaagtggagatata
cttataacaacatcaactggtgcatatggatattcaatgtcttcaaattataataaaata
ccaagagcagcagtagtatcagtatttgatggaaatgataagataatttgtaagagacaa
agctatgaggacttattagctttagagatataa
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