Clostridioides difficile 630Derm: CD630DERM_25900
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Entry
CD630DERM_25900 CDS
T03785
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase (DAP epimerase)
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf00300
Lysine biosynthesis
pdf00470
D-Amino acid metabolism
pdf01100
Metabolic pathways
pdf01110
Biosynthesis of secondary metabolites
pdf01120
Microbial metabolism in diverse environments
pdf01230
Biosynthesis of amino acids
Module
pdf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD630DERM_25900 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD630DERM_25900 (dapF)
Enzymes [BR:
pdf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CD630DERM_25900 (dapF)
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Ortholog
Paralog
Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CEJ99217
UniProt:
A0A031WCK0
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All DBs
Position
1:complement(2953023..2953853)
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AA seq
276 aa
AA seq
DB search
MKFWKLHGIGNDFIAIDGRFDQINPSDYTALAKKVCHRRFSVGADGLLVVKDSKVADVEM
VYYNSDGSRAAMCGNGLRCFCKFVYDNCIVKKESFTVDTLDGIKDIKINLTNREINSIRV
NMGKGSFIAKDVPVLTNKERFVQESIKVLDRELKVTSMLMGVPHTVVIVDELDVDDVCKY
GKEIENNKIFPEKTNVNFVKVEDKYNIHVYTWERGCGYTLGCGTGMTASAIVCNLLNMVE
SSVNVTSQGGTVKIDVGDFSYMTGPAVKICEGILEV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttggaaactacatggaataggaaatgattttatagcaatagatggaagattc
gaccagataaatccatctgattatactgctttagcaaaaaaagtatgccatagaagattt
tctgtaggagcggatggattgttagttgtgaaagattcaaaagttgcagatgtagaaatg
gtatattataattctgatggttcaagagcagctatgtgtggaaatggccttagatgtttt
tgtaaatttgtttatgataattgtatagttaaaaaagaaagttttacagtagatacatta
gatggtataaaagatataaaaataaatcttaccaatagagaaataaactctataagagtc
aatatgggaaaaggaagttttatagctaaagacgttcctgtacttacaaataaagaacgt
tttgtgcaagaaagtataaaggttttagatagggagcttaaagttacttctatgttgatg
ggggttcctcatacagtagttatagtagatgaattagatgtagatgatgtttgtaaatat
ggaaaagagattgaaaataataaaatatttcctgaaaaaacgaatgtaaattttgtaaag
gtagaagataagtataatatacatgtttatacttgggaaagaggttgtggatatacttta
ggttgtggtactggtatgactgcatcagcaatagtgtgcaatttacttaatatggtagaa
agtagtgtaaatgtaacgtctcaaggtggaacagttaaaatagatgtaggagatttctct
tatatgacaggtccagcagtaaaaatatgtgaaggtattttggaggtttaa
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