Clostridioides difficile 630Derm: CD630DERM_26030
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Entry
CD630DERM_26030 CDS
T03785
Symbol
cdtR
Name
(GenBank) Clostridium difficile binary toxin regulatorygene, LytTR family
KO
K07707
two-component system, LytTR family, response regulator AgrA
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf02020
Two-component system
pdf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CD630DERM_26030 (cdtR)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD630DERM_26030 (cdtR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pdf02022
]
CD630DERM_26030 (cdtR)
Two-component system [BR:
pdf02022
]
LytTR family
AgrC-AgrA (exoprotein synthesis)
CD630DERM_26030 (cdtR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LytTR
Response_reg
Motif
Other DBs
NCBI-ProteinID:
CEJ99230
UniProt:
F5B5V8
LinkDB
All DBs
Position
1:2969463..2970209
Genome browser
AA seq
248 aa
AA seq
DB search
MDILIFDNDVCFGMKLKEKINNILIKEGFDNDVVRLYHNANLLLKELTEKNKVRIYFIVV
DAKYKISNELCDGLWIAQKIRESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEI
AESKIKACIKIAHKRYIKEKNYRSNFFTIYSDFSLWKISFDEVIYFETSTIPHKIKLVTT
SRIFEFYKSLKSLPDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRN
ILKNIIKT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggatatattaatctttgataatgatgtttgttttggaatgaaactaaaagaaaaaata
aataatattttaataaaagaaggttttgataatgatgttgtaagattatatcataatgca
aatttgttattaaaagagcttactgaaaaaaataaagtaagaatatattttatagttgta
gacgcaaaatataagataagtaatgaattatgtgatggattatggatagcacaaaaaatt
agagaatcagattatattagtccaatcatatttcttacaaatcatatagaaatgatttta
gggatcttcgattataggttagaagttatggactttatactaaaacatgatatggaaatt
gctgaaagtaaaataaaagcttgtattaaaattgctcacaaaagatacattaaagaaaaa
aattatcgctctaatttttttactatctattcagatttctcactatggaaaatttcattt
gatgaagttatatattttgaaacaagcactattccacataaaataaaattagtgactact
tctagaatatttgaattctataaaagtttaaagtctttaccagatttagatgcatgcttt
atccgtgtacataaatcttttgtagttaataaatatcatattgtttctctcgacctaaag
aaaaataatattaaaatgagtaatggccatatatgtcgtatatctaatacatatagaaat
attttaaagaatattattaaaacataa
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